HHAL005991-PA (Halyomorpha halys)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HHAL005991-PA T144067_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.809 0.855
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.797 0.928
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.797 0.928
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.797 0.928
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.797 0.928
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.797 0.928
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.797 0.928
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.797 0.928
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.797 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HHAL005991-PA C2H2 ZF 58 80
HHAL005991-PA C2H2 ZF 86 108
HHAL005991-PA C2H2 ZF 114 137

Links

Other C2H2 ZF family TFs
Other Halyomorpha halys TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC02G35740 Oryza punctata OPUNC02G35740 N
Pavir.J04759 Panicum virgatum Pavir.J04759 N
Pavir.J01346 Panicum virgatum Pavir.J01346 N
Pavir.J00689 Panicum virgatum Pavir.J00689 N
Traes_7DL_EECCC4DBF Triticum aestivum Traes_7DL_EECCC4DBF N
Si023448m.g Setaria italica Si023448m.g N
Si007412m.g Setaria italica Si007412m.g N
Sb10g030400 Sorghum bicolor Sb10g030400 N
Sb04g038600 Sorghum bicolor Sb04g038600 N
OS02G0833600 Oryza sativa OS02G0833600 N
ORUFI02G40230 Oryza rufipogon ORUFI02G40230 N
ORGLA02G0337900 Oryza glaberrima ORGLA02G0337900 N
BGIOSGA005293 Oryza indica BGIOSGA005293 N
OMERI02G36320 Oryza meridionalis OMERI02G36320 N
OGLUM02G39710 Oryza glumaepatula OGLUM02G39710 N
OBART02G38520 Oryza barthii OBART02G38520 N
OB02G45490 Oryza brachyantha OB02G45490 N
MLOC_14243 Hordeum vulgare MLOC_14243 N
LPERR02G31960 Leersia perrieri LPERR02G31960 N
GRMZM2G402862 Zea mays GRMZM2G402862 N
GRMZM2G073892 Zea mays GRMZM2G073892 N
BRADI3G60870 Brachypodium distachyon BRADI3G60870 N
BRADI1G29920 Brachypodium distachyon BRADI1G29920 N