fezf1 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-985988 T145715_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.815 0.986
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.815 0.986
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.794 0.891
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.794 0.891
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.794 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI21870 C2H2 ZF 260 282
AAI21870 C2H2 ZF 288 310
AAI21870 C2H2 ZF 316 338
AAI21870 C2H2 ZF 344 366
AAI21870 C2H2 ZF 372 394
AAI21870 C2H2 ZF 400 423

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP53 Arabidopsis thaliana AT3G62420 D 0.000
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I 0.000
Carubv10018852m.g Capsella rubella Carubv10018852m.g I 0.000
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I 0.000
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.000
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.000
MDP0000234798 Malus domestica MDP0000234798 I 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
PK03779.1 Cannabis sativa PK03779.1 I 0.000
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I 0.000
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
MDP0000949327 Malus domestica MDP0000949327 I 0.000
MDP0000437680 Malus domestica MDP0000437680 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.000
Lus10025024.g Linum usitatissimum Lus10025024.g I 0.000
Lus10010005.g Linum usitatissimum Lus10010005.g I 0.000
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I 0.000
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA19G40390 Glycine max GLYMA19G40390 I 0.000
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I 0.000
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I 0.000
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.000
GSMUA_Achr1G25340_001 Musa acuminata GSMUA_Achr1G25340_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA03G37790 Glycine max GLYMA03G37790 I 0.000
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I 0.000
Bra007679 Brassica rapa Bra007679 I 0.000
Bra003500 Brassica rapa Bra003500 I 0.000
Bo8g097830 Brassica oleracea Bo8g097830 I 0.000
Bo6g079450 Brassica oleracea Bo6g079450 I 0.000
TCM_004807 Theobroma cacao TCM_004807 I 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
30076.m004659 Ricinus communis 30076.m004659 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Ca_03512 Cicer arietinum Ca_03512 I 0.000
Ca_01004 Cicer arietinum Ca_01004 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I 0.000
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I 0.000
mgf022473m Mimulus guttatus mgf022473m N 0.000
Si023562m.g Setaria italica Si023562m.g N 0.000
GLYMA10G01640 Glycine max GLYMA10G01640 N 0.000
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.000