XP_002937203 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XP_002937203 T145775_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937203 C2H2 ZF 534 556
XP_002937203 C2H2 ZF 562 584
XP_002937203 C2H2 ZF 590 612
XP_002937203 C2H2 ZF 618 640

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG010969.1 Alligator sinensis Alligator_sinensis_CCG010969.1 N 0.776
prdm1a Oryzias latipes ENSORLG00000015684 N 0.815
ENSPFOG00000019374 Poecilia formosa ENSPFOG00000019374 N 0.764
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N 0.827
prdm1 Takifugu rubripes ENSTRUG00000000404 N 0.815
ENSTRUG00000007847 Takifugu rubripes ENSTRUG00000007847 N 0.798
ENSXMAG00000003417 Xiphophorus maculatus ENSXMAG00000003417 N 0.764
GL12308 Drosophila persimilis FBgn0149915 N 0.784
Afo_R003683 Aptenodytes forsteri Afo_R003683 N 0.827
ENSORLG00000012948 Oryzias latipes ENSORLG00000012948 N 0.764
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N 0.824
Gfo_R012197 Geospiza fortis Gfo_R012197 N 0.817
Ogr18550 Ophisaurus gracilis Ogr18550 N 0.825
Pvit_09291 Pogona vitticeps Pvit_09291 N 0.825
estExt_fgenesh2_pg.C_440053 Branchiostoma floridae estExt_fgenesh2_pg.C_440053 N 0.809
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N 0.809
prdm1.S Xenopus laevis XB-GENE-853257 N 0.824
EEL_0000388201 Elaeophora elaphi EEL_0000388201 N 0.767
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N 0.827
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N 0.827
PRDM1 Bos taurus ENSBTAG00000000816 N 0.824
prdm1a Danio rerio ENSDARG00000002445 N 0.824
ZNF683 Dasypus novemcinctus ENSDNOG00000043822 N 0.761
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N 0.827
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N 0.815
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N 0.825
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N 0.827
PRDM1 Anolis carolinensis ENSACAG00000005496 N 0.825
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N 0.783
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N 0.827
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N 0.827
ENSMPUG00000015726 Mustela putorius furo ENSMPUG00000015726 N 0.756
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N 0.768
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N 0.824
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N 0.815