BXY_0993100 (Bursaphelenchus xylophilus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BXY_0993100 T152483_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.758 0.728
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.758 0.728
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.758 0.728
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BXY_0993100.1 C2H2 ZF 584 606
BXY_0993100.1 C2H2 ZF 612 634
BXY_0993100.1 C2H2 ZF 640 662
BXY_0993100.1 C2H2 ZF 668 690
BXY_0993100.1 C2H2 ZF 696 717

Links

Other C2H2 ZF family TFs
Other Bursaphelenchus xylophilus TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I
Si039730m.g Setaria italica Si039730m.g I
Si013911m.g Setaria italica Si013911m.g I
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I
Sb07g021170 Sorghum bicolor Sb07g021170 I
Sb01g040450 Sorghum bicolor Sb01g040450 I
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I
OS09G0410700 Oryza sativa OS09G0410700 I
OS08G0432800 Oryza sativa OS08G0432800 I
OS03G0260600 Oryza sativa OS03G0260600 I
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I
OPUNC08G13730 Oryza punctata OPUNC08G13730 I
ONIVA09G09550 Oryza nivara ONIVA09G09550 I
ONIVA08G16750 Oryza nivara ONIVA08G16750 I
ONIVA03G12280 Oryza nivara ONIVA03G12280 I
OMERI09G07780 Oryza meridionalis OMERI09G07780 I
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I
Lus10041493.g Linum usitatissimum Lus10041493.g I
Lus10034271.g Linum usitatissimum Lus10034271.g I
Carubv10020515m.g Capsella rubella Carubv10020515m.g I
Carubv10017470m.g Capsella rubella Carubv10017470m.g I
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I
Cla000223 Citrullus lanatus Cla000223 I
Ca_24775 Cicer arietinum Ca_24775 I
TRIUR3_31897 Triticum urartu TRIUR3_31897 I
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I
Bra025158 Brassica rapa Bra025158 I
GRMZM2G107276 Zea mays GRMZM2G107276 I
GRMZM2G043854 Zea mays GRMZM2G043854 I
GLYMA02G11190 Glycine max GLYMA02G11190 I
GLYMA01G22530 Glycine max GLYMA01G22530 I
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I
F775_10096 Aegilops tauschii F775_10096 I
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I
Bra026510 Brassica rapa Bra026510 I
OLONG_004075 Oryza longistaminata OLONG_004075 I
Bra004338 Brassica rapa Bra004338 I
Bra004015 Brassica rapa Bra004015 I
Bo7g081980 Brassica oleracea Bo7g081980 I
Bo6g108270 Brassica oleracea Bo6g108270 I
Bo2g138630 Brassica oleracea Bo2g138630 I
BGIOSGA029777 Oryza indica BGIOSGA029777 I
BGIOSGA026937 Oryza indica BGIOSGA026937 I
BHLH32 Arabidopsis thaliana AT3G25710 I
BHLH30 Arabidopsis thaliana AT1G68810 I
LPERR09G06880 Leersia perrieri LPERR09G06880 I
OMERI08G12930 Oryza meridionalis OMERI08G12930 I
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I
OBART08G15650 Oryza barthii OBART08G15650 I
OBART03G11320 Oryza barthii OBART03G11320 I
OB03G21490 Oryza brachyantha OB03G21490 I
MLOC_66385 Hordeum vulgare MLOC_66385 I
LPERR08G12910 Leersia perrieri LPERR08G12910 I
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I
GRMZM2G526668 Zea mays GRMZM2G526668 I
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I
LPERR03G10060 Leersia perrieri LPERR03G10060 I
evm.TU.supercontig_65.63 Carica papaya evm.TU.supercontig_65.63 N
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N
OGLUM09G10310 Oryza glumaepatula OGLUM09G10310 N
Si030496m.g Setaria italica Si030496m.g N
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N
Sb02g024460 Sorghum bicolor Sb02g024460 N
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N
Gorai.012G124100 Gossypium raimondii Gorai.012G124100 N
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N
Ca_18110 Cicer arietinum Ca_18110 N
OB09G16590 Oryza brachyantha OB09G16590 N
Ca_14981 Cicer arietinum Ca_14981 N
MTR_5g066080 Medicago truncatula MTR_5g066080 N
GLYMA01G02930 Glycine max GLYMA01G02930 N
MLOC_12832 Hordeum vulgare MLOC_12832 N
GRMZM2G176141 Zea mays GRMZM2G176141 N
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N