HPLM_0001133101 (Haemonchus placei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HPLM_0001133101 T154269_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-2
M00645_2.00 		Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN		 PBM
Narasimhan et al.(2015)
pTH9354 		0.777 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0001133101-mRNA-1 C2H2 ZF 123 145
HPLM_0001133101-mRNA-1 C2H2 ZF 151 173
HPLM_0001133101-mRNA-1 C2H2 ZF 179 202

Links

Other C2H2 ZF family TFs
Other Haemonchus placei TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
klu-2 Caenorhabditis elegans WBGene00022592 D 0.777
BXY_0680200 Bursaphelenchus xylophilus BXY_0680200 I 0.760
TELCIR_01018 Teladorsagia circumcincta TELCIR_01018 I 0.823
TCNE_0000622401 Toxocara canis TCNE_0000622401 I 0.777
L893_g30492 Steinernema glaseri L893_g30492 I 0.757
L889_g28325 Steinernema feltiae L889_g28325 I 0.773
L596_g11489 Steinernema carpocapsae L596_g11489 I 0.760
HCOI01254700 Haemonchus contortus HCOI01254700 I 0.827
CBG12610 Caenorhabditis briggsae CBG12610 I 0.777
ASU_05504 Ascaris suum ASU_05504 I 0.760
ANCCEY_13832 Ancylostoma ceylanicum ANCCEY_13832 I 0.824
ANCCAN_17930 Ancylostoma caninum ANCCAN_17930 I 0.824
CRE07023 Caenorhabditis remanei CRE07023 I 0.777
CJA33261 Caenorhabditis japonica CJA33261 I 0.780
CBN19187 Caenorhabditis brenneri CBN19187 I 0.777
CBN10213 Caenorhabditis brenneri CBN10213 I 0.777
GPLIN_000062600 Globodera pallida GPLIN_000062600 N 0.770
GPLIN_001154300 Globodera pallida GPLIN_001154300 N 0.770
PPA04971 Pristionchus pacificus PPA04971 N 0.770
RSKR_0000033200 Rhabditophanes kr3021 RSKR_0000033200 N 0.777
scaffold607-EXSNAP2012.9 Pristionchus exspectatus scaffold607-EXSNAP2012.9 N 0.770