TIGD1 (Pan troglodytes)
CENPB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04218 (CENP-B_N) IPR006695 ENSPTRG00000038833 T161722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TIGD1
M01204_2.00 		Homo sapiens
NTATTGCGSN
NSCGCAATAN		 PBM
Lambert et al.(2019)
pTH11227 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000060514 CENPB 9 61

Links

Other CENPB family TFs
Other Pan troglodytes TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FUS3 Arabidopsis thaliana AT3G26790 D
30131.m006860 Ricinus communis 30131.m006860 I
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I
MDP0000268649 Malus domestica MDP0000268649 I
Lus10041521.g Linum usitatissimum Lus10041521.g I
Lus10012572.g Linum usitatissimum Lus10012572.g I
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I
Carubv10019353m.g Capsella rubella Carubv10019353m.g I
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I
cassava14836.m1 Manihot esculenta cassava14836.m1 I
cassava11393.m1 Manihot esculenta cassava11393.m1 I
Pm016099 Prunus mume Pm016099 I
Cla009252 Citrullus lanatus Cla009252 I
Ca_05976 Cicer arietinum Ca_05976 I
FUS3 Vitis vinifera VIT_14s0068g01290 I
TCM_017321 Theobroma cacao TCM_017321 I
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I
MTR_7g083700 Medicago truncatula MTR_7g083700 I
GLYMA19G27336 Glycine max GLYMA19G27336 I
GLYMA16G05480 Glycine max GLYMA16G05480 I
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I
Bra032953 Brassica rapa Bra032953 I
Bo7g083910 Brassica oleracea Bo7g083910 I
Bo00285s530 Brassica oleracea Bo00285s530 I
SapurV1A.1101s0020 Salix purpurea SapurV1A.1101s0020 N