GNLVRS01_PISO0A06138g (Millerozyma farinosa)
Copper fist

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00649 (Copper-fist) IPR001083 GNLVRS01_PISO0A06138g T163849_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAA1
M08553_2.00 		Saccharomyces cerevisiae
SMGGSG
CSCCKS		 Misc
DeBoer et al.(2011)
YPR008W_1425 		0.872 0.872
CUP2
M08549_2.00 		Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA		 Misc
DeBoer et al.(2011)
YGL166W_48.1 		0.744 0.744
CUP2
M08550_2.00 		Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA		 Misc
DeBoer et al.(2011)
YGL166W_48.2 		0.744 0.744
CUP2
M08551_2.00 		Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA		 Misc
DeBoer et al.(2011)
YGL166W_48.3 		0.744 0.744
CUP2
M10408_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CUP2_Q4 		0.744 0.744
CUP2
M08453_2.00 		Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG		 COMPILED
Mathelier et al.(2014)
MA0287.1 		0.744 0.744
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE72701 Copper fist 2 40

Links

Other Copper fist family TFs
Other Millerozyma farinosa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000295749 Malus domestica MDP0000295749 N
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N
Carubv10000255m.g Capsella rubella Carubv10000255m.g N
Carubv10013017m.g Capsella rubella Carubv10013017m.g N
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N
evm.TU.supercontig_16.55 Carica papaya evm.TU.supercontig_16.55 N
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N
Gorai.006G255400 Gossypium raimondii Gorai.006G255400 N
MDP0000254218 Malus domestica MDP0000254218 N
Cagra.0263s0023 Capsella grandiflora Cagra.0263s0023 N
orange1.1g004138m.g Citrus sinensis orange1.1g004138m.g N
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N
PK22885.1 Cannabis sativa PK22885.1 N
FRS7 Arabidopsis thaliana AT3G06250 N
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N
mgf011099m Mimulus guttatus mgf011099m N
mgf010461m Mimulus guttatus mgf010461m N
Cucsa.253860 Cucumis sativus Cucsa.253860 N
cassava1998.valid.m1 Manihot esculenta cassava1998.valid.m1 N
Pm008044 Prunus mume Pm008044 N
TCM_021065 Theobroma cacao TCM_021065 N
Solyc10g084220.1 Solanum lycopersicum Solyc10g084220.1 N
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N
GLYMA15G10830 Glycine max GLYMA15G10830 N
GLYMA13G28230 Glycine max GLYMA13G28230 N
Bo3g013440 Brassica oleracea Bo3g013440 N
FRS12 Arabidopsis thaliana AT5G18960 N