gene11124-v1.0-hybrid (Fragaria vesca)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 gene11124-v1.0-hybrid T165447_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna11124.1-v1.0-hybrid CSD 8 74

Links

Other CSD family TFs
Other Fragaria vesca TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.727
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.712
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.712
PK01533.1 Cannabis sativa PK01533.1 N 0.712
SapurV1A.0010s0820 Salix purpurea SapurV1A.0010s0820 N 0.803
Pavir.Ab00211 Panicum virgatum Pavir.Ab00211 N 0.714
orange1.1g030905m.g Citrus sinensis orange1.1g030905m.g N 0.848
Lus10028073.g Linum usitatissimum Lus10028073.g N 0.758
Gorai.010G048300 Gossypium raimondii Gorai.010G048300 N 0.727
Gorai.009G243500 Gossypium raimondii Gorai.009G243500 N 0.742
evm.TU.supercontig_36.17 Carica papaya evm.TU.supercontig_36.17 N 0.773
Eucgr.F03759 Eucalyptus grandis Eucgr.F03759 N 0.788
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.712
Ciclev10002696m.g Citrus clementina Ciclev10002696m.g N 0.848
mgf020853m Mimulus guttatus mgf020853m N 0.742
29908.m006148 Ricinus communis 29908.m006148 N 0.864
VIT_04s0023g03520 Vitis vinifera VIT_04s0023g03520 N 0.727
TCM_035057 Theobroma cacao TCM_035057 N 0.758
POPTR_0005s15990 Populus trichocarpa POPTR_0005s15990 N 0.864
POPTR_0002s08740 Populus trichocarpa POPTR_0002s08740 N 0.833
BRADI1G02650 Brachypodium distachyon BRADI1G02650 N 0.727
BRADI1G02640 Brachypodium distachyon BRADI1G02640 N 0.742