CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene26519-v1.0-hybrid
(
Fragaria vesca
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
gene26519-v1.0-hybrid
T165449_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna26519.1-v1.0-hybrid
CSD
5
71
LTGKVKWFNDQKGFDFITPENGGEDLSFHQSSIRTAGFRTLGYGESVEFQIRTDNHGRSKAVDVIGP
Links
Other
CSD
family TFs
Other
Fragaria vesca
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm020837
Prunus mume
Pm020837
I
0.758
Ca_11038
Cicer arietinum
Ca_11038
N
0.712
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.712
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.742
Eucgr.I01395
Eucalyptus grandis
Eucgr.I01395
N
0.707
evm.TU.supercontig_37.170
Carica papaya
evm.TU.supercontig_37.170
N
0.727
gene07618-v1.0-hybrid
Fragaria vesca
gene07618-v1.0-hybrid
N
0.848
MDP0000225222
Malus domestica
MDP0000225222
N
0.712