CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000292743
(
Malus domestica
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
MDP0000292743
T165473_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000292743
CSD
6
72
STEKVRWFNDVKGYGFITPDDGGEDLFVHQSSIRSNDFHTIMEGESVEFFIDFGDDSKTKAVDVTGP
Links
Other
CSD
family TFs
Other
Malus domestica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa010531mg
Prunus persica
PRUPE_ppa010531mg
N
0.727
Pm026767
Prunus mume
Pm026767
N
0.727
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.712
cassava29163.valid.m1
Manihot esculenta
cassava29163.valid.m1
N
0.727
MDP0000121628
Malus domestica
MDP0000121628
N
0.879
MDP0000198079
Malus domestica
MDP0000198079
N
0.848
MDP0000632148
Malus domestica
MDP0000632148
N
0.848