D915_08968 (Fasciola hepatica)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 D915_08968 T166399_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.727 0.727
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.727 0.727
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.712 0.712
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.712 0.712
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.712 0.712
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.712 0.712
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.712 0.712
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.712 0.712
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.712 0.712
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.712 0.712
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.712 0.712
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.712 0.712
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.712 0.712
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.712 0.712
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_08968 CSL 1 68

Links

Other CSL family TFs
Other Fasciola hepatica TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020349 Oryza indica BGIOSGA020349 I
Pavir.J33948 Panicum virgatum Pavir.J33948 I
Pavir.J11649 Panicum virgatum Pavir.J11649 I
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I
Si022565m.g Setaria italica Si022565m.g I
Sb09g028350 Sorghum bicolor Sb09g028350 I
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I
OS05G0560600 Oryza sativa OS05G0560600 I
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I
OPUNC05G23220 Oryza punctata OPUNC05G23220 I
ONIVA05G26860 Oryza nivara ONIVA05G26860 I
OMERI02G35600 Oryza meridionalis OMERI02G35600 I
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I
OBART05G25610 Oryza barthii OBART05G25610 I
BGIOSGA020351 Oryza indica BGIOSGA020351 I
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I
GRMZM2G157219 Zea mays GRMZM2G157219 I
GLYMA12G33850 Glycine max GLYMA12G33850 I
BGIOSGA001035 Oryza indica BGIOSGA001035 N
Lus10007273.g Linum usitatissimum Lus10007273.g N
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N
GRMZM2G023119 Zea mays GRMZM2G023119 N
OS01G0674000 Oryza sativa OS01G0674000 N
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N
OPUNC01G26130 Oryza punctata OPUNC01G26130 N
OMERI01G23900 Oryza meridionalis OMERI01G23900 N
LPERR01G22430 Leersia perrieri LPERR01G22430 N
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N