GLYMA12G33850 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA12G33850 T249116_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.843 0.630
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.843 0.630
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G33850.1 MADF 40 121

Links

Other MADF family TFs
Other Glycine max TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.937
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.924
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.910
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.905
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.898
Ca_19877 Cicer arietinum Ca_19877 I 0.894
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.888
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.885
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.880
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.880
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.875
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.875
29900.m001628 Ricinus communis 29900.m001628 I 0.872
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.872
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.872
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.872
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.860
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.860
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.859
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.859
OBART05G25610 Oryza barthii OBART05G25610 I 0.859
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.859
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.859
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.859
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.859
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.859
OS05G0560600 Oryza sativa OS05G0560600 I 0.859
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.852
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.852
Ca_00394 Cicer arietinum Ca_00394 I 0.852
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.851
TCM_029695 Theobroma cacao TCM_029695 I 0.850
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.849
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.848
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.845
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.845
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.845
Si022565m.g Setaria italica Si022565m.g I 0.845
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.845
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.845
Bra003346 Brassica rapa Bra003346 I 0.844
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.843
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.843
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.843
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.843
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.843
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.843
Bo6g075950 Brassica oleracea Bo6g075950 I 0.842
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.841
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.841
MDP0000301451 Malus domestica MDP0000301451 I 0.840
Cla009854 Citrullus lanatus Cla009854 I 0.838
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.837
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.834
Cla002288 Citrullus lanatus Cla002288 I 0.834
Bra007407 Brassica rapa Bra007407 I 0.829
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.829
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.828
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.828
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.828
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.828
Solyc07g055100.2 Solanum lycopersicum Solyc07g055100.2 N 0.815
PK27986.1 Cannabis sativa PK27986.1 I 0.815
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.814
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.813
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.812
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.812
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.812
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.812
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.812
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.812
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.812
OS01G0674000 Oryza sativa OS01G0674000 N 0.812
mgf001239m Mimulus guttatus mgf001239m N 0.812