OBART05G25610 (Oryza barthii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OBART05G25610 T249536_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.853 0.676
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.853 0.676
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART05G25610.1 MADF 25 102

Links

Other MADF family TFs
Other Oryza barthii TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.971
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.971
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.971
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.971
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.971
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.971
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.971
OS05G0560600 Oryza sativa OS05G0560600 I 0.971
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.968
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.964
Si022565m.g Setaria italica Si022565m.g I 0.964
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.964
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.964
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.961
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.956
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.938
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.932
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.932
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.930
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.922
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.922
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.922
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.922
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.922
OS01G0674000 Oryza sativa OS01G0674000 N 0.922
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.916
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.912
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.912
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.909
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.907
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.892
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.890
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.890
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.877
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.872
29900.m001628 Ricinus communis 29900.m001628 I 0.870
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.870
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.870
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.869
Cla019967 Citrullus lanatus Cla019967 I 0.868
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.868
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.868
Ca_19877 Cicer arietinum Ca_19877 I 0.867
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.861
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.861
TCM_042467 Theobroma cacao TCM_042467 N 0.860
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.860
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.859
Bo6g075950 Brassica oleracea Bo6g075950 I 0.856
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.856
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.856
Bra003346 Brassica rapa Bra003346 I 0.854
MDP0000301451 Malus domestica MDP0000301451 I 0.854
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.853
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.853
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.853
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.853
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.852
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.851
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.851
mgf006505m Mimulus guttatus mgf006505m I 0.846
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.844
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.844
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.844
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.844
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.843
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.842
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.842
Cla002288 Citrullus lanatus Cla002288 I 0.835
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.831
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.831
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.831
TCM_029695 Theobroma cacao TCM_029695 I 0.831
Ca_00394 Cicer arietinum Ca_00394 I 0.831
PK27986.1 Cannabis sativa PK27986.1 I 0.831
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.830
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.830
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.828
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.823
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.823
29814.m000741 Ricinus communis 29814.m000741 I 0.820
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.819
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.819
Cla009854 Citrullus lanatus Cla009854 I 0.816