MTR_4g079960 (Medicago truncatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MTR_4g079960 T249461_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.879 0.712
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.879 0.712
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES89785 MADF 42 123
KEH30727 MADF 42 123
KEH30728 MADF 42 123

Links

Other MADF family TFs
Other Medicago truncatula TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.922
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.920
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.918
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.918
Ca_19877 Cicer arietinum Ca_19877 I 0.916
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.912
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.912
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.911
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.904
29900.m001628 Ricinus communis 29900.m001628 I 0.904
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.904
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.904
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.901
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.898
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.898
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.895
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.895
Ca_00394 Cicer arietinum Ca_00394 I 0.895
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.895
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.894
TCM_029695 Theobroma cacao TCM_029695 I 0.894
Cla009854 Citrullus lanatus Cla009854 I 0.894
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.892
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.892
Cla002288 Citrullus lanatus Cla002288 I 0.891
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.889
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.889
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.887
MDP0000301451 Malus domestica MDP0000301451 I 0.887
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.887
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.886
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.883
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.879
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.879
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.879
Bo6g075950 Brassica oleracea Bo6g075950 I 0.878
Bra003346 Brassica rapa Bra003346 I 0.878
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.878
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.878
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.876
PK27986.1 Cannabis sativa PK27986.1 I 0.868
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.867
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.867
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.866
Cucsa.195790 Cucumis sativus Cucsa.195790 N 0.865
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.853
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.853
OBART05G25610 Oryza barthii OBART05G25610 I 0.853
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.853
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.853
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.853
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.853
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.853
OS05G0560600 Oryza sativa OS05G0560600 I 0.853
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.842
Cla019967 Citrullus lanatus Cla019967 I 0.842
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.842
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.842
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.838
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.838
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.838
Si022565m.g Setaria italica Si022565m.g I 0.838
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.838
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.838
mgf000047m Mimulus guttatus mgf000047m I 0.833
mgf001239m Mimulus guttatus mgf001239m N 0.833
Bra007407 Brassica rapa Bra007407 I 0.827
29814.m000741 Ricinus communis 29814.m000741 I 0.826
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.825
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.825
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.825
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.822
MDP0000097759 Malus domestica MDP0000097759 N 0.817
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.815
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.815
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.815