GLYMA13G36650 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA13G36650 T249120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.888 0.658
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.888 0.658
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G36650.1 MADF 40 121

Links

Other MADF family TFs
Other Glycine max TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.937
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.931
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.930
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.912
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.910
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.898
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.897
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.895
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.895
Ca_00394 Cicer arietinum Ca_00394 I 0.895
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.894
TCM_029695 Theobroma cacao TCM_029695 I 0.893
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.893
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.891
Bra003346 Brassica rapa Bra003346 I 0.889
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.888
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.888
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.888
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.888
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.888
Bo6g075950 Brassica oleracea Bo6g075950 I 0.887
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.887
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.887
Ca_19877 Cicer arietinum Ca_19877 I 0.886
MDP0000301451 Malus domestica MDP0000301451 I 0.886
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.885
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.883
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.881
Bra007407 Brassica rapa Bra007407 I 0.877
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.877
29900.m001628 Ricinus communis 29900.m001628 I 0.872
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.872
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.872
PK27986.1 Cannabis sativa PK27986.1 I 0.867
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.865
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.865
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.865
Cla009854 Citrullus lanatus Cla009854 I 0.854
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.851
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.843
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.843
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.841
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.838
Cla002288 Citrullus lanatus Cla002288 I 0.834
Solyc07g055100.2 Solanum lycopersicum Solyc07g055100.2 N 0.832
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.826
PGSC0003DMG400020421 Solanum tuberosum PGSC0003DMG400020421 N 0.823
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.822
mgf001239m Mimulus guttatus mgf001239m N 0.816