TTAC_0000009401 (Hydatigera taeniaeformis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) TTAC_0000009401 T174982_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.768 0.768
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.761 0.761
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.761 0.761
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.761 0.761
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.761 0.761
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.761 0.761
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.755 0.755
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.742 0.742
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000009401-mRNA-1 EBF1 8 162

Links

Other EBF1 family TFs
Other Hydatigera taeniaeformis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL14 Arabidopsis thaliana AT1G20980 D
SPL4 Arabidopsis thaliana AT1G53160 D
AT1G76580 Arabidopsis thaliana AT1G76580 D
SPL1 Arabidopsis thaliana AT2G47070 D
SPL5 Arabidopsis thaliana AT3G15270 D
SPL12 Arabidopsis thaliana AT3G60030 D
POPTR_0002s00440 Populus trichocarpa POPTR_0002s00440 D
PRUPE_ppa000682mg Prunus persica PRUPE_ppa000682mg D
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D
PK06791.1 Cannabis sativa PK06791.1 D
PK22320.1 Cannabis sativa PK22320.1 D
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I
AMTR_s00022p00106940 Amborella trichopoda AMTR_s00022p00106940 I
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I
AMTR_s00062p00211520 Amborella trichopoda AMTR_s00062p00211520 I
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I
BGIOSGA016888 Oryza indica BGIOSGA016888 I
SPL15 Oryza indica BGIOSGA028994 I
Bo2g091010 Brassica oleracea Bo2g091010 I
Bo4g005730 Brassica oleracea Bo4g005730 I
Bo4g042390 Brassica oleracea Bo4g042390 I
Bo5g030930 Brassica oleracea Bo5g030930 I
Bo5g127310 Brassica oleracea Bo5g127310 I
Bo6g029290 Brassica oleracea Bo6g029290 I
Bo6g031220 Brassica oleracea Bo6g031220 I
Bo6g120690 Brassica oleracea Bo6g120690 I
Bra005470 Brassica rapa Bra005470 I
Bra015732 Brassica rapa Bra015732 I
Bra025863 Brassica rapa Bra025863 I
Bra027265 Brassica rapa Bra027265 I
Bra038101 Brassica rapa Bra038101 I
Bra039656 Brassica rapa Bra039656 I
Bra041037 Brassica rapa Bra041037 I
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I
BRADI3G40240 Brachypodium distachyon BRADI3G40240 I
F775_27970 Aegilops tauschii F775_27970 I
F775_31139 Aegilops tauschii F775_31139 I
SPL14 Arabidopsis lyrata fgenesh2_kg.1__2292__AT1G20980.1 I
SPL4 Arabidopsis lyrata fgenesh2_kg.1__4389__AT1G53160.2 I
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I
GLYMA02G01160 Glycine max GLYMA02G01160 I
GLYMA06G36140 Glycine max GLYMA06G36140 I
GLYMA07G36180 Glycine max GLYMA07G36180 I
GLYMA09G09790 Glycine max GLYMA09G09790 I
GLYMA10G01211 Glycine max GLYMA10G01211 I
GLYMA12G27330 Glycine max GLYMA12G27330 I
GLYMA12G35460 Glycine max GLYMA12G35460 I
GLYMA13G35000 Glycine max GLYMA13G35000 I
GLYMA15G21860 Glycine max GLYMA15G21860 I
GLYMA17G04400 Glycine max GLYMA17G04400 I
GRMZM2G138421 Zea mays GRMZM2G138421 I
GRMZM2G156756 Zea mays GRMZM2G156756 I
GRMZM2G169270 Zea mays GRMZM2G169270 I
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I
LPERR03G34030 Leersia perrieri LPERR03G34030 I
LPERR08G16940 Leersia perrieri LPERR08G16940 I
LPERR08G17180 Leersia perrieri LPERR08G17180 I
MLOC_13032 Hordeum vulgare MLOC_13032 I
MLOC_4792 Hordeum vulgare MLOC_4792 I
MLOC_4830 Hordeum vulgare MLOC_4830 I
MLOC_6525 Hordeum vulgare MLOC_6525 I
MTR_1g086250 Medicago truncatula MTR_1g086250 I
MTR_2g046550 Medicago truncatula MTR_2g046550 I
MTR_7g110320 Medicago truncatula MTR_7g110320 I
MTR_8g463140 Medicago truncatula MTR_8g463140 I
OB03G47050 Oryza brachyantha OB03G47050 I
OB04G27960 Oryza brachyantha OB04G27960 I
OB08G27190 Oryza brachyantha OB08G27190 I
OBART03G39900 Oryza barthii OBART03G39900 I
OBART04G20940 Oryza barthii OBART04G20940 I
OBART08G20320 Oryza barthii OBART08G20320 I
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I
OGLUM08G21580 Oryza glumaepatula OGLUM08G21580 I
OLONG_014873 Oryza longistaminata OLONG_014873 I
OMERI02G02300 Oryza meridionalis OMERI02G02300 I
OMERI03G36740 Oryza meridionalis OMERI03G36740 I
OMERI04G17360 Oryza meridionalis OMERI04G17360 I
ONIVA03G41820 Oryza nivara ONIVA03G41820 I
ONIVA04G19190 Oryza nivara ONIVA04G19190 I
ONIVA08G22940 Oryza nivara ONIVA08G22940 I
OPUNC03G37130 Oryza punctata OPUNC03G37130 I
OPUNC03G37170 Oryza punctata OPUNC03G37170 I
OPUNC04G18620 Oryza punctata OPUNC04G18620 I
OPUNC08G18470 Oryza punctata OPUNC08G18470 I
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I
ORGLA08G0179900 Oryza glaberrima ORGLA08G0179900 I
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I
ORUFI08G22780 Oryza rufipogon ORUFI08G22780 I
SPL6 Oryza sativa OS03G0833300 I
SPL7 Oryza sativa OS04G0551500 I
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I
PGSC0003DMG400027151 Solanum tuberosum PGSC0003DMG400027151 I
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I
POPTR_0005s28010 Populus trichocarpa POPTR_0005s28010 I
POPTR_0007s01030 Populus trichocarpa POPTR_0007s01030 I
POPTR_0008s09810 Populus trichocarpa POPTR_0008s09810 I
POPTR_0010s16370 Populus trichocarpa POPTR_0010s16370 I
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I
Sb01g002530 Sorghum bicolor Sb01g002530 I
Sb06g024630 Sorghum bicolor Sb06g024630 I
scaffold_202615.1 Arabidopsis lyrata scaffold_202615.1 I
SPL12 Arabidopsis lyrata scaffold_503227.1 I
SELMODRAFT_28595 Selaginella moellendorffii SELMODRAFT_28595 I
SELMODRAFT_28598 Selaginella moellendorffii SELMODRAFT_28598 I
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I
Si032170m.g Setaria italica Si032170m.g I
Si034095m.g Setaria italica Si034095m.g I
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I
Solyc05g053240.2 Solanum lycopersicum Solyc05g053240.2 I
TCM_004922 Theobroma cacao TCM_004922 I
TCM_021482 Theobroma cacao TCM_021482 I
TCM_029832 Theobroma cacao TCM_029832 I
TCM_031595 Theobroma cacao TCM_031595 I
TCM_034803 Theobroma cacao TCM_034803 I
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I
Traes_7AS_0F019FB93 Triticum aestivum Traes_7AS_0F019FB93 I
Traes_7DS_AB399594E Triticum aestivum Traes_7DS_AB399594E I
TRIUR3_10193 Triticum urartu TRIUR3_10193 I
TRIUR3_23102 Triticum urartu TRIUR3_23102 I
TRIUR3_31982 Triticum urartu TRIUR3_31982 I
TRIUR3_33729 Triticum urartu TRIUR3_33729 I
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I
VIT_19s0014g02350 Vitis vinifera VIT_19s0014g02350 I
Ca_01036 Cicer arietinum Ca_01036 I
Ca_03548 Cicer arietinum Ca_03548 I
Ca_16243 Cicer arietinum Ca_16243 I
Ca_18591 Cicer arietinum Ca_18591 I
Ca_22526 Cicer arietinum Ca_22526 I
Cla002263 Citrullus lanatus Cla002263 I
Cla017596 Citrullus lanatus Cla017596 I
Cla023735 Citrullus lanatus Cla023735 I
Pm011381 Prunus mume Pm011381 I
Pm022881 Prunus mume Pm022881 I
28211.m000132 Ricinus communis 28211.m000132 I
29889.m003388 Ricinus communis 29889.m003388 I
29983.m003158 Ricinus communis 29983.m003158 I
30076.m004574 Ricinus communis 30076.m004574 I
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I
cassava31252.valid.m1 Manihot esculenta cassava31252.valid.m1 I
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I
cassava7404.valid.m1 Manihot esculenta cassava7404.valid.m1 I
Cucsa.192470 Cucumis sativus Cucsa.192470 I
Cucsa.196000 Cucumis sativus Cucsa.196000 I
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I
gw1.313.30.1 Physcomitrella patens gw1.313.30.1 I
mgf000195m Mimulus guttatus mgf000195m I
mgf002455m Mimulus guttatus mgf002455m I
mgf009459m Mimulus guttatus mgf009459m I
mgf025134m Mimulus guttatus mgf025134m I
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I
Bostr.0124s0106 Boechera stricta Bostr.0124s0106 I
Bostr.20129s0096 Boechera stricta Bostr.20129s0096 I
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I
Bostr.28625s0189 Boechera stricta Bostr.28625s0189 I
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I
Bostr.7128s0689 Boechera stricta Bostr.7128s0689 I
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I
Cagra.1472s0017 Capsella grandiflora Cagra.1472s0017 I
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I
Carubv10008169m.g Capsella rubella Carubv10008169m.g I
Carubv10010422m.g Capsella rubella Carubv10010422m.g I
Carubv10012577m.g Capsella rubella Carubv10012577m.g I
Carubv10014636m.g Capsella rubella Carubv10014636m.g I
Carubv10016658m.g Capsella rubella Carubv10016658m.g I
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I
Eucgr.E03260 Eucalyptus grandis Eucgr.E03260 I
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I
evm.TU.supercontig_36.105 Carica papaya evm.TU.supercontig_36.105 I
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I
Gorai.002G068300 Gossypium raimondii Gorai.002G068300 I
Gorai.002G112200 Gossypium raimondii Gorai.002G112200 I
Gorai.005G071400 Gossypium raimondii Gorai.005G071400 I
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I
Gorai.011G029400 Gossypium raimondii Gorai.011G029400 I
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I
Lus10004523.g Linum usitatissimum Lus10004523.g I
Lus10010071.g Linum usitatissimum Lus10010071.g I
MDP0000149339 Malus domestica MDP0000149339 I
MDP0000156994 Malus domestica MDP0000156994 I
MDP0000158607 Malus domestica MDP0000158607 I
MDP0000180408 Malus domestica MDP0000180408 I
MDP0000180409 Malus domestica MDP0000180409 I
MDP0000861601 Malus domestica MDP0000861601 I
MDP0000919693 Malus domestica MDP0000919693 I
MDP0000919694 Malus domestica MDP0000919694 I
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I
Pavir.J01500 Panicum virgatum Pavir.J01500 I
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I
SapurV1A.0016s0070 Salix purpurea SapurV1A.0016s0070 I
SapurV1A.0072s0370 Salix purpurea SapurV1A.0072s0370 I
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I
SapurV1A.0176s0510 Salix purpurea SapurV1A.0176s0510 I
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I
SapurV1A.0554s0130 Salix purpurea SapurV1A.0554s0130 I
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I
Thhalv10006656m.g Eutrema salsugineum Thhalv10006656m.g I
Thhalv10011728m.g Eutrema salsugineum Thhalv10011728m.g I
Thhalv10018054m.g Eutrema salsugineum Thhalv10018054m.g I
Thhalv10018065m.g Eutrema salsugineum Thhalv10018065m.g I
Thhalv10021617m.g Eutrema salsugineum Thhalv10021617m.g I
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I
LjSGA_121222.1 Lotus japonicus LjSGA_121222.1 I
PDK_20s1709081g002 Phoenix dactylifera PDK_20s1709081g002 I