FHY3 (Arabidopsis thaliana)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 AT3G22170 T178986_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00		 Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1		 (Direct) (Direct)
FHY3
M09540_2.00		 Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G22170.1 FAR1 84 186
AT3G22170.2 FAR1 84 186

Links

Other FAR1 family TFs
Other Arabidopsis thaliana TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA037065 Oryza indica BGIOSGA037065 N
LPERR12G04020 Leersia perrieri LPERR12G04020 N
OB12G14220 Oryza brachyantha OB12G14220 N
OGLUM12G05080 Oryza glumaepatula OGLUM12G05080 N
ONIVA12G03970 Oryza nivara ONIVA12G03970 N
OPUNC12G04340 Oryza punctata OPUNC12G04340 N
ORGLA12G0040600 Oryza glaberrima ORGLA12G0040600 N
STAR3 Oryza sativa OS12G0170400 N
Si010000m.g Setaria italica Si010000m.g N
Pavir.Cb01989 Panicum virgatum Pavir.Cb01989 N
Pavir.J02020 Panicum virgatum Pavir.J02020 N