Carubv10000255m.g (Capsella rubella)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Carubv10000255m.g T181263_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10000255m FAR1 65 140
Carubv10000255m FAR1 232 308
Carubv10000262m FAR1 57 132
Carubv10000262m FAR1 224 300

Links

Other FAR1 family TFs
Other Capsella rubella TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000295749 Malus domestica MDP0000295749 N 0.771
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N 0.954
Carubv10013017m.g Capsella rubella Carubv10013017m.g N 0.954
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N 0.804
evm.TU.supercontig_16.55 Carica papaya evm.TU.supercontig_16.55 N 0.856
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N 0.758
Gorai.006G255400 Gossypium raimondii Gorai.006G255400 N 0.824
MDP0000254218 Malus domestica MDP0000254218 N 0.753
Cagra.0263s0023 Capsella grandiflora Cagra.0263s0023 N 1.000
orange1.1g004138m.g Citrus sinensis orange1.1g004138m.g N 0.799
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N 0.765
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N 0.766
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N 0.765
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N 0.974
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N 0.967
PK22885.1 Cannabis sativa PK22885.1 N 0.797
FRS7 Arabidopsis thaliana AT3G06250 N 0.961
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N 0.993
Bostr.2570s0035 Boechera stricta Bostr.2570s0035 N 0.954
mgf011099m Mimulus guttatus mgf011099m N 0.719
mgf010461m Mimulus guttatus mgf010461m N 0.725
Cucsa.253860 Cucumis sativus Cucsa.253860 N 0.740
cassava1998.valid.m1 Manihot esculenta cassava1998.valid.m1 N 0.810
Pm008044 Prunus mume Pm008044 N 0.765
TCM_021065 Theobroma cacao TCM_021065 N 0.856
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N 0.765
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N 0.799
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N 0.778
GLYMA15G10830 Glycine max GLYMA15G10830 N 0.725
GLYMA13G28230 Glycine max GLYMA13G28230 N 0.752
Bo3g013440 Brassica oleracea Bo3g013440 N 0.974
FRS12 Arabidopsis thaliana AT5G18960 N 0.987