gene00440-v1.0-hybrid (Fragaria vesca)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 gene00440-v1.0-hybrid T181392_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna00440.1-v1.0-hybrid FAR1 304 394

Links

Other FAR1 family TFs
Other Fragaria vesca TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N
Eucgr.J00509 Eucalyptus grandis Eucgr.J00509 N
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N
Eucgr.I00583 Eucalyptus grandis Eucgr.I00583 N
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N
Carubv10017870m.g Capsella rubella Carubv10017870m.g N
Carubv10001788m.g Capsella rubella Carubv10001788m.g N
Cagra.2192s0006 Capsella grandiflora Cagra.2192s0006 N
Cagra.0846s0014 Capsella grandiflora Cagra.0846s0014 N
Bostr.26527s0039 Boechera stricta Bostr.26527s0039 N
Bostr.0556s0732 Boechera stricta Bostr.0556s0732 N
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N
Cucsa.185760 Cucumis sativus Cucsa.185760 N
Cucsa.083530 Cucumis sativus Cucsa.083530 N
cassava32867.m1 Manihot esculenta cassava32867.m1 N
cassava15688.m1 Manihot esculenta cassava15688.m1 N
Lus10004846.g Linum usitatissimum Lus10004846.g N
PK27925.1 Cannabis sativa PK27925.1 N
Thhalv10014563m.g Eutrema salsugineum Thhalv10014563m.g N
Thhalv10010503m.g Eutrema salsugineum Thhalv10010503m.g N
SapurV1A.1671s0050 Salix purpurea SapurV1A.1671s0050 N
SapurV1A.0450s0140 Salix purpurea SapurV1A.0450s0140 N
Pavir.J36282 Panicum virgatum Pavir.J36282 N
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N
MDP0000759504 Malus domestica MDP0000759504 N
MDP0000205938 Malus domestica MDP0000205938 N
MDP0000130797 Malus domestica MDP0000130797 N
Lus10020643.g Linum usitatissimum Lus10020643.g N
cassava14235.m1 Manihot esculenta cassava14235.m1 N
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N
gene21734-v1.0-hybrid Fragaria vesca gene21734-v1.0-hybrid N
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N
Eucgr.J00516 Eucalyptus grandis Eucgr.J00516 N
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N
Bra020188 Brassica rapa Bra020188 N
LPERR11G02950 Leersia perrieri LPERR11G02950 N
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N
GRMZM2G439903 Zea mays GRMZM2G439903 N
GLYMA19G38211 Glycine max GLYMA19G38211 N
GLYMA13G39160 Glycine max GLYMA13G39160 N
GLYMA12G31150 Glycine max GLYMA12G31150 N
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N
F775_13455 Aegilops tauschii F775_13455 N
MLOC_60153 Hordeum vulgare MLOC_60153 N
Bra019459 Brassica rapa Bra019459 N
Bra019442 Brassica rapa Bra019442 N
Bra002408 Brassica rapa Bra002408 N
Bo9g148540 Brassica oleracea Bo9g148540 N
Bo3g123480 Brassica oleracea Bo3g123480 N
Bo3g122200 Brassica oleracea Bo3g122200 N
Bo3g016870 Brassica oleracea Bo3g016870 N
Bo2g023870 Brassica oleracea Bo2g023870 N
BGIOSGA037019 Oryza indica BGIOSGA037019 N
NAC090 Arabidopsis thaliana AT5G22380 N
anac061 Arabidopsis thaliana AT3G44350 N
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N
30055.m001588 Ricinus communis 30055.m001588 N
Pm001403 Prunus mume Pm001403 N
Cla018691 Citrullus lanatus Cla018691 N
Cla008777 Citrullus lanatus Cla008777 N
Ca_00818 Cicer arietinum Ca_00818 N
VIT_18s0041g00700 Vitis vinifera VIT_18s0041g00700 N
VIT_06s0080g00780 Vitis vinifera VIT_06s0080g00780 N
TRIUR3_33275 Triticum urartu TRIUR3_33275 N
Traes_5DL_43FC1B296 Triticum aestivum Traes_5DL_43FC1B296 N
TCM_041364 Theobroma cacao TCM_041364 N
anac061 Arabidopsis lyrata Al_scaffold_0005_1163 N
POPTR_0001s22630 Populus trichocarpa POPTR_0001s22630 N
OS12G0156100 Oryza sativa OS12G0156100 N
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N
OPUNC12G03240 Oryza punctata OPUNC12G03240 N
ONIVA12G03060 Oryza nivara ONIVA12G03060 N
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N
OBART12G03440 Oryza barthii OBART12G03440 N
OB12G13350 Oryza brachyantha OB12G13350 N
MTR_7g105170 Medicago truncatula MTR_7g105170 N
MTR_2g086690 Medicago truncatula MTR_2g086690 N