Pavir.J26020 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.J26020 T181851_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J26020.1.p FAR1 82 175

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29417.m000034 Ricinus communis 29417.m000034 N
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N
Carubv10019494m.g Capsella rubella Carubv10019494m.g N
Cagra.6011s0013 Capsella grandiflora Cagra.6011s0013 N
Bostr.13158s0066 Boechera stricta Bostr.13158s0066 N
Aquca_013_00703 Aquilegia coerulea Aquca_013_00703 N
Cucsa.132770 Cucumis sativus Cucsa.132770 N
Cucsa.120560 Cucumis sativus Cucsa.120560 N
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N
cassava14439.m1 Manihot esculenta cassava14439.m1 N
30174.m008836 Ricinus communis 30174.m008836 N
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N
Pm017841 Prunus mume Pm017841 N
Cla006768 Citrullus lanatus Cla006768 N
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N
VIT_00s0233g00100 Vitis vinifera VIT_00s0233g00100 N
TRIUR3_33737 Triticum urartu TRIUR3_33737 N
TRIUR3_16881 Triticum urartu TRIUR3_16881 N
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N
PK01122.1 Cannabis sativa PK01122.1 N
Thhalv10006374m.g Eutrema salsugineum Thhalv10006374m.g N
SapurV1A.0382s0270 Salix purpurea SapurV1A.0382s0270 N
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N
Pavir.J35161 Panicum virgatum Pavir.J35161 N
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N
TCM_016018 Theobroma cacao TCM_016018 N
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N
Lus10009283.g Linum usitatissimum Lus10009283.g N
Gorai.008G237000 Gossypium raimondii Gorai.008G237000 N
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N
Gorai.003G169800 Gossypium raimondii Gorai.003G169800 N
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N
evm.TU.supercontig_29.132 Carica papaya evm.TU.supercontig_29.132 N
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N
Eucgr.E01501 Eucalyptus grandis Eucgr.E01501 N
GLYMA11G17770 Glycine max GLYMA11G17770 N
LPERR02G05550 Leersia perrieri LPERR02G05550 N
LPERR02G04770 Leersia perrieri LPERR02G04770 N
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N
GRMZM2G070295 Zea mays GRMZM2G070295 N
GRMZM2G017882 Zea mays GRMZM2G017882 N
GLYMA15G17040 Glycine max GLYMA15G17040 N
MLOC_37403 Hordeum vulgare MLOC_37403 N
GLYMA09G05781 Glycine max GLYMA09G05781 N
GLYMA01G17580 Glycine max GLYMA01G17580 N
fgenesh2_kg.5__2532__AT3G60670.1 Arabidopsis lyrata fgenesh2_kg.5__2532__AT3G60670.1 N
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N
Bra014478 Brassica rapa Bra014478 N
Bo4g104880 Brassica oleracea Bo4g104880 N
BGIOSGA007635 Oryza indica BGIOSGA007635 N
BGIOSGA007009 Oryza indica BGIOSGA007009 N
AT3G60670 Arabidopsis thaliana AT3G60670 N
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N
OS02G0183000 Oryza sativa OS02G0183000 N
TCM_005554 Theobroma cacao TCM_005554 N
Solyc01g091000.2 Solanum lycopersicum Solyc01g091000.2 N
Si019544m.g Setaria italica Si019544m.g N
Si018139m.g Setaria italica Si018139m.g N
Sb04g005680 Sorghum bicolor Sb04g005680 N
Sb04g004830 Sorghum bicolor Sb04g004830 N
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N
POPTR_0014s05840 Populus trichocarpa POPTR_0014s05840 N
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N
OS02G0172800 Oryza sativa OS02G0172800 N
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N
OPUNC02G05490 Oryza punctata OPUNC02G05490 N
OPUNC02G04680 Oryza punctata OPUNC02G04680 N
ONIVA02G05860 Oryza nivara ONIVA02G05860 N
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N
OBART02G05520 Oryza barthii OBART02G05520 N
OB02G15630 Oryza brachyantha OB02G15630 N
OB02G14750 Oryza brachyantha OB02G14750 N