CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CME102C
(
Cyanidioschyzon merolae
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CME102C
T192285_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CME102CT
GATA
134
169
CAQCGATVTPLWRSGPAGPKSLCNACGVRYKKRLHH
Links
Other
GATA
family TFs
Other
Cyanidioschyzon merolae
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa015310mg
Prunus persica
PRUPE_ppa015310mg
I
0.802
PK21934.1
Cannabis sativa
PK21934.1
I
0.804
Pavir.Eb04066
Panicum virgatum
Pavir.Eb04066
I
0.805
MDP0000309902
Malus domestica
MDP0000309902
I
0.808
Pm003128
Prunus mume
Pm003128
I
0.802
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.816
TRIUR3_03165
Triticum urartu
TRIUR3_03165
I
0.805
TRAES3BF026000060CFD_g
Triticum aestivum
TRAES3BF026000060CFD_g
I
0.805
Traes_3AL_6DE434492
Triticum aestivum
Traes_3AL_6DE434492
I
0.805
Si002983m.g
Setaria italica
Si002983m.g
I
0.805
Sb03g047520
Sorghum bicolor
Sb03g047520
I
0.805
OS01G0976800
Oryza sativa
OS01G0976800
I
0.805
OBART01G45830
Oryza barthii
OBART01G45830
I
0.805
BGIOSGA000005
Oryza indica
BGIOSGA000005
I
0.805
BRADI2G62660
Brachypodium distachyon
BRADI2G62660
I
0.805
LPERR04G11580
Leersia perrieri
LPERR04G11580
I
0.805
MLOC_54886
Hordeum vulgare
MLOC_54886
I
0.805
OB01G55040
Oryza brachyantha
OB01G55040
I
0.805
ORUFI01G49320
Oryza rufipogon
ORUFI01G49320
I
0.805
OGLUM01G50190
Oryza glumaepatula
OGLUM01G50190
I
0.805
OLONG_011157
Oryza longistaminata
OLONG_011157
I
0.805
ONIVA01G52080
Oryza nivara
ONIVA01G52080
I
0.805
ORGLA01G0395900
Oryza glaberrima
ORGLA01G0395900
I
0.805
SELMODRAFT_451362
Selaginella moellendorffii
SELMODRAFT_451362
N
0.814
SELMODRAFT_107936
Selaginella moellendorffii
SELMODRAFT_107936
N
0.814
Lus10029863.g
Linum usitatissimum
Lus10029863.g
N
0.812
GRMZM2G138967
Zea mays
GRMZM2G138967
N
0.805
Pavir.Ab00108
Panicum virgatum
Pavir.Ab00108
N
0.805
AMTR_s00147p00053080
Amborella trichopoda
AMTR_s00147p00053080
N
0.816