OBART05G03900 (Oryza barthii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OBART05G03900 T194360_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART05G03900.1 GATA 31 66

Links

Other GATA family TFs
Other Oryza barthii TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC05G03600 Oryza punctata OPUNC05G03600 N 0.867
Pavir.J34225 Panicum virgatum Pavir.J34225 N 0.450
Pavir.J31164 Panicum virgatum Pavir.J31164 N 0.862
Pavir.Eb02364 Panicum virgatum Pavir.Eb02364 N 0.853
Pavir.Ea01306 Panicum virgatum Pavir.Ea01306 N 0.853
Eucgr.H01071 Eucalyptus grandis Eucgr.H01071 N 0.809
cassava16506.m1 Manihot esculenta cassava16506.m1 N 0.816
Si011269m.g Setaria italica Si011269m.g N 0.862
Si004417m.g Setaria italica Si004417m.g N 0.853
Sb09g004315 Sorghum bicolor Sb09g004315 N 0.862
Sb03g013700 Sorghum bicolor Sb03g013700 N 0.853
OS05G0155400 Oryza sativa OS05G0155400 N 0.867
OS01G0343300 Oryza sativa OS01G0343300 N 0.853
ORUFI01G16060 Oryza rufipogon ORUFI01G16060 N 0.853
ORGLA05G0036200 Oryza glaberrima ORGLA05G0036200 N 0.867
ORGLA01G0118700 Oryza glaberrima ORGLA01G0118700 N 0.853
AC194965.4_FG004 Zea mays AC194965.4_FG004 N 0.862
OPUNC01G14080 Oryza punctata OPUNC01G14080 N 0.853
ONIVA04G04160 Oryza nivara ONIVA04G04160 N 0.853
OLONG_020882 Oryza longistaminata OLONG_020882 N 0.867
OGLUM01G16180 Oryza glumaepatula OGLUM01G16180 N 0.853
OBART01G14380 Oryza barthii OBART01G14380 N 0.853
OB05G13650 Oryza brachyantha OB05G13650 N 0.867
OB01G24090 Oryza brachyantha OB01G24090 N 0.853
LPERR01G13070 Leersia perrieri LPERR01G13070 N 0.853
GRMZM2G104390 Zea mays GRMZM2G104390 N 0.853
GRMZM2G052616 Zea mays GRMZM2G052616 N 0.853
BRADI2G35057 Brachypodium distachyon BRADI2G35057 N 0.848
BRADI2G12590 Brachypodium distachyon BRADI2G12590 N 0.861
Bra009926 Brassica rapa Bra009926 N 0.811
BGIOSGA018779 Oryza indica BGIOSGA018779 N 0.867
GATA23 Arabidopsis thaliana AT5G26930 N 0.822