CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G052616
(
Zea mays
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GRMZM2G052616
T193550_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G052616_P01
GATA
22
57
CVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQ
Links
Other
GATA
family TFs
Other
Zea mays
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G104390
Zea mays
GRMZM2G104390
N
0.867
LPERR01G13070
Leersia perrieri
LPERR01G13070
N
0.867
OB01G24090
Oryza brachyantha
OB01G24090
N
0.867
OBART01G14380
Oryza barthii
OBART01G14380
N
0.867
OGLUM01G16180
Oryza glumaepatula
OGLUM01G16180
N
0.867
ONIVA04G04160
Oryza nivara
ONIVA04G04160
N
0.867
OPUNC01G14080
Oryza punctata
OPUNC01G14080
N
0.867
ORGLA01G0118700
Oryza glaberrima
ORGLA01G0118700
N
0.867
ORUFI01G16060
Oryza rufipogon
ORUFI01G16060
N
0.867
OS01G0343300
Oryza sativa
OS01G0343300
N
0.867
Sb03g013700
Sorghum bicolor
Sb03g013700
N
0.867
Si004417m.g
Setaria italica
Si004417m.g
N
0.867
Pavir.Ea01306
Panicum virgatum
Pavir.Ea01306
N
0.867
Pavir.Eb02364
Panicum virgatum
Pavir.Eb02364
N
0.867
BRADI2G35057
Brachypodium distachyon
BRADI2G35057
N
0.862
BGIOSGA018779
Oryza indica
BGIOSGA018779
N
0.853
OB05G13650
Oryza brachyantha
OB05G13650
N
0.853
OBART05G03900
Oryza barthii
OBART05G03900
N
0.853
OLONG_020882
Oryza longistaminata
OLONG_020882
N
0.853
OPUNC05G03600
Oryza punctata
OPUNC05G03600
N
0.853
ORGLA05G0036200
Oryza glaberrima
ORGLA05G0036200
N
0.853
OS05G0155400
Oryza sativa
OS05G0155400
N
0.853
AC194965.4_FG004
Zea mays
AC194965.4_FG004
N
0.848
Sb09g004315
Sorghum bicolor
Sb09g004315
N
0.848
Si011269m.g
Setaria italica
Si011269m.g
N
0.848
Pavir.J31164
Panicum virgatum
Pavir.J31164
N
0.848
BRADI2G12590
Brachypodium distachyon
BRADI2G12590
N
0.847
GATA23
Arabidopsis thaliana
AT5G26930
N
0.808
Pavir.J34225
Panicum virgatum
Pavir.J34225
N
0.450