GATA23 (Arabidopsis thaliana)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AT5G26930 T191729_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a member of the GATA factor family of zinc finger transcription factors. Controls lateral root founder cell specification.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G26930.1 GATA 28 63

Links

Other GATA family TFs
Other Arabidopsis thaliana TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra009926 Brassica rapa Bra009926 N 0.842
Pavir.J31164 Panicum virgatum Pavir.J31164 N 0.827
AC194965.4_FG004 Zea mays AC194965.4_FG004 N 0.827
Sb09g004315 Sorghum bicolor Sb09g004315 N 0.827
Si011269m.g Setaria italica Si011269m.g N 0.827
BRADI2G12590 Brachypodium distachyon BRADI2G12590 N 0.825
OLONG_020882 Oryza longistaminata OLONG_020882 N 0.822
Bostr.29827s0125 Boechera stricta Bostr.29827s0125 N 0.822
ORGLA05G0036200 Oryza glaberrima ORGLA05G0036200 N 0.822
OS05G0155400 Oryza sativa OS05G0155400 N 0.822
Cagra.0418s0011 Capsella grandiflora Cagra.0418s0011 N 0.822
OPUNC05G03600 Oryza punctata OPUNC05G03600 N 0.822
Carubv10003065m.g Capsella rubella Carubv10003065m.g N 0.822
OBART05G03900 Oryza barthii OBART05G03900 N 0.822
OB05G13650 Oryza brachyantha OB05G13650 N 0.822
BGIOSGA018779 Oryza indica BGIOSGA018779 N 0.822
GATA23 Arabidopsis lyrata Al_scaffold_0006_2616 N 0.822
BRADI2G35057 Brachypodium distachyon BRADI2G35057 N 0.812
Thhalv10005181m.g Eutrema salsugineum Thhalv10005181m.g N 0.812
Si004417m.g Setaria italica Si004417m.g N 0.808
Pavir.Eb02364 Panicum virgatum Pavir.Eb02364 N 0.808
Sb03g013700 Sorghum bicolor Sb03g013700 N 0.808
Pavir.Ea01306 Panicum virgatum Pavir.Ea01306 N 0.808
OPUNC01G14080 Oryza punctata OPUNC01G14080 N 0.808
OB01G24090 Oryza brachyantha OB01G24090 N 0.808
LPERR01G13070 Leersia perrieri LPERR01G13070 N 0.808
GRMZM2G104390 Zea mays GRMZM2G104390 N 0.808
GRMZM2G052616 Zea mays GRMZM2G052616 N 0.808
OBART01G14380 Oryza barthii OBART01G14380 N 0.808
OGLUM01G16180 Oryza glumaepatula OGLUM01G16180 N 0.808
ORUFI01G16060 Oryza rufipogon ORUFI01G16060 N 0.808
ORGLA01G0118700 Oryza glaberrima ORGLA01G0118700 N 0.808
ONIVA04G04160 Oryza nivara ONIVA04G04160 N 0.808
OS01G0343300 Oryza sativa OS01G0343300 N 0.808