CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GATA23
(
Arabidopsis thaliana
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AT5G26930
T191729_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G26930.1
GATA
28
63
CSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS
Links
Other
GATA
family TFs
Other
Arabidopsis thaliana
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra009926
Brassica rapa
Bra009926
N
0.842
AC194965.4_FG004
Zea mays
AC194965.4_FG004
N
0.827
Sb09g004315
Sorghum bicolor
Sb09g004315
N
0.827
Si011269m.g
Setaria italica
Si011269m.g
N
0.827
Pavir.J31164
Panicum virgatum
Pavir.J31164
N
0.827
BRADI2G12590
Brachypodium distachyon
BRADI2G12590
N
0.825
GATA23
Arabidopsis lyrata
Al_scaffold_0006_2616
N
0.822
BGIOSGA018779
Oryza indica
BGIOSGA018779
N
0.822
OB05G13650
Oryza brachyantha
OB05G13650
N
0.822
OBART05G03900
Oryza barthii
OBART05G03900
N
0.822
OLONG_020882
Oryza longistaminata
OLONG_020882
N
0.822
OPUNC05G03600
Oryza punctata
OPUNC05G03600
N
0.822
ORGLA05G0036200
Oryza glaberrima
ORGLA05G0036200
N
0.822
OS05G0155400
Oryza sativa
OS05G0155400
N
0.822
Bostr.29827s0125
Boechera stricta
Bostr.29827s0125
N
0.822
Cagra.0418s0011
Capsella grandiflora
Cagra.0418s0011
N
0.822
Carubv10003065m.g
Capsella rubella
Carubv10003065m.g
N
0.822
BRADI2G35057
Brachypodium distachyon
BRADI2G35057
N
0.812
Thhalv10005181m.g
Eutrema salsugineum
Thhalv10005181m.g
N
0.812
GRMZM2G052616
Zea mays
GRMZM2G052616
N
0.808
GRMZM2G104390
Zea mays
GRMZM2G104390
N
0.808
LPERR01G13070
Leersia perrieri
LPERR01G13070
N
0.808
OB01G24090
Oryza brachyantha
OB01G24090
N
0.808
OBART01G14380
Oryza barthii
OBART01G14380
N
0.808
OGLUM01G16180
Oryza glumaepatula
OGLUM01G16180
N
0.808
ONIVA04G04160
Oryza nivara
ONIVA04G04160
N
0.808
OPUNC01G14080
Oryza punctata
OPUNC01G14080
N
0.808
ORGLA01G0118700
Oryza glaberrima
ORGLA01G0118700
N
0.808
ORUFI01G16060
Oryza rufipogon
ORUFI01G16060
N
0.808
OS01G0343300
Oryza sativa
OS01G0343300
N
0.808
Sb03g013700
Sorghum bicolor
Sb03g013700
N
0.808
Si004417m.g
Setaria italica
Si004417m.g
N
0.808
Pavir.Ea01306
Panicum virgatum
Pavir.Ea01306
N
0.808
Pavir.Eb02364
Panicum virgatum
Pavir.Eb02364
N
0.808