CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GATA23
(
Arabidopsis lyrata
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Al_scaffold_0006_2616
T191667_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0006_2616
GATA
28
63
CSDCKTTKTPMWRGGPTGPKSLCNACGIRFRKQRRS
Links
Other
GATA
family TFs
Other
Arabidopsis lyrata
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.29827s0125
Boechera stricta
Bostr.29827s0125
N
0.867
Cagra.0418s0011
Capsella grandiflora
Cagra.0418s0011
N
0.867
Carubv10003065m.g
Capsella rubella
Carubv10003065m.g
N
0.867
Thhalv10005181m.g
Eutrema salsugineum
Thhalv10005181m.g
N
0.842
GATA23
Arabidopsis thaliana
AT5G26930
N
0.822
Bra009926
Brassica rapa
Bra009926
N
0.812