OGLUM02G26320 (Oryza glumaepatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OGLUM02G26320 T194385_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.856 0.944
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.856 0.944
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.847 0.806
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.832 0.778
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.832 0.778
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.778
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.778
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.778
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.832 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.828 0.917
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.722
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.722
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM02G26320.1 GATA 350 385
OGLUM02G26320.2 GATA 287 322

Links

Other GATA family TFs
Other Oryza glumaepatula TFs

610 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP68 Arabidopsis thaliana AT1G32150 D
GBF3 Arabidopsis thaliana AT2G46270 D
GBF2 Arabidopsis thaliana AT4G01120 D
GBF1 Arabidopsis thaliana AT4G36730 D
Q40645_ORYSA Oryza sativa Q40645_ORYSA D
CPRF1_PETCR Petroselinum crispum CPRF1_PETCR D
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D
PK09653.1 Cannabis sativa PK09653.1 D
GBF2 Arabidopsis lyrata Al_scaffold_0006_3899 I
BGIOSGA001085 Oryza indica BGIOSGA001085 I
BGIOSGA020389 Oryza indica BGIOSGA020389 I
Bo1g005460 Brassica oleracea Bo1g005460 I
Bo3g039150 Brassica oleracea Bo3g039150 I
Bo4g010410 Brassica oleracea Bo4g010410 I
Bo4g038560 Brassica oleracea Bo4g038560 I
Bo9g003700 Brassica oleracea Bo9g003700 I
Bra004550 Brassica rapa Bra004550 I
Bra010572 Brassica rapa Bra010572 I
Bra011701 Brassica rapa Bra011701 I
Bra037382 Brassica rapa Bra037382 I
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I
F775_07803 Aegilops tauschii F775_07803 I
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I
GLYMA03G41590 Glycine max GLYMA03G41590 I
GLYMA07G06620 Glycine max GLYMA07G06620 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA09G34170 Glycine max GLYMA09G34170 I
GLYMA16G03190 Glycine max GLYMA16G03190 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
GLYMA19G44190 Glycine max GLYMA19G44190 I
GRMZM2G011932 Zea mays GRMZM2G011932 I
GRMZM2G117851 Zea mays GRMZM2G117851 I
GRMZM2G160136 Zea mays GRMZM2G160136 I
GRMZM2G358701 Zea mays GRMZM2G358701 I
GRMZM5G848942 Zea mays GRMZM5G848942 I
GSMUA_Achr1G05050_001 Musa acuminata GSMUA_Achr1G05050_001 I
GSMUA_Achr6G32000_001 Musa acuminata GSMUA_Achr6G32000_001 I
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I
LPERR01G21580 Leersia perrieri LPERR01G21580 I
LPERR05G21930 Leersia perrieri LPERR05G21930 I
MLOC_6711 Hordeum vulgare MLOC_6711 I
MTR_5g028850 Medicago truncatula MTR_5g028850 I
MTR_7g116890 Medicago truncatula MTR_7g116890 I
MTR_8g070820 Medicago truncatula MTR_8g070820 I
OB01G34490 Oryza brachyantha OB01G34490 I
OB05G33790 Oryza brachyantha OB05G33790 I
OBART01G25300 Oryza barthii OBART01G25300 I
OBART05G26280 Oryza barthii OBART05G26280 I
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I
OLONG_003667 Oryza longistaminata OLONG_003667 I
OLONG_022047 Oryza longistaminata OLONG_022047 I
OMERI01G23000 Oryza meridionalis OMERI01G23000 I
OMERI03G30340 Oryza meridionalis OMERI03G30340 I
ONIVA01G28540 Oryza nivara ONIVA01G28540 I
ONIVA05G28290 Oryza nivara ONIVA05G28290 I
OPUNC01G25140 Oryza punctata OPUNC01G25140 I
OPUNC02G01690 Oryza punctata OPUNC02G01690 I
OPUNC05G23850 Oryza punctata OPUNC05G23850 I
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I
OS01G0658900 Oryza sativa OS01G0658900 I
OS05G0569300 Oryza sativa OS05G0569300 I
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I
PRUPE_ppa020524mg Prunus persica PRUPE_ppa020524mg I
Sb03g030050 Sorghum bicolor Sb03g030050 I
Sb09g028990 Sorghum bicolor Sb09g028990 I
GBF1 Arabidopsis lyrata scaffold_700433.1 I
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I
Si001929m.g Setaria italica Si001929m.g I
Si022388m.g Setaria italica Si022388m.g I
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I
TCM_005210 Theobroma cacao TCM_005210 I
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I
TRIUR3_18341 Triticum urartu TRIUR3_18341 I
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I
GBF1 Vitis vinifera VIT_04s0023g01360 I
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I
Ca_01293 Cicer arietinum Ca_01293 I
Ca_11455 Cicer arietinum Ca_11455 I
Ca_15839 Cicer arietinum Ca_15839 I
Ca_17787 Cicer arietinum Ca_17787 I
Cla008988 Citrullus lanatus Cla008988 I
Cla016502 Citrullus lanatus Cla016502 I
Cla021500 Citrullus lanatus Cla021500 I
Pm018422 Prunus mume Pm018422 I
Pm024103 Prunus mume Pm024103 I
Pm026586 Prunus mume Pm026586 I
29646.m001068 Ricinus communis 29646.m001068 I
30174.m008698 Ricinus communis 30174.m008698 I
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I
cassava45491.m1 Manihot esculenta cassava45491.m1 I
cassava46468.m1 Manihot esculenta cassava46468.m1 I
Cucsa.258940 Cucumis sativus Cucsa.258940 I
Cucsa.312800 Cucumis sativus Cucsa.312800 I
Cucsa.322110 Cucumis sativus Cucsa.322110 I
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I
mgf003302m Mimulus guttatus mgf003302m I
mgf013423m Mimulus guttatus mgf013423m I
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I
Carubv10001247m.g Capsella rubella Carubv10001247m.g I
Carubv10005287m.g Capsella rubella Carubv10005287m.g I
Carubv10023434m.g Capsella rubella Carubv10023434m.g I
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I
gene32022-v1.0-hybrid Fragaria vesca gene32022-v1.0-hybrid I
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I
Lus10003034.g Linum usitatissimum Lus10003034.g I
Lus10005146.g Linum usitatissimum Lus10005146.g I
Lus10014324.g Linum usitatissimum Lus10014324.g I
Lus10026033.g Linum usitatissimum Lus10026033.g I
MDP0000138052 Malus domestica MDP0000138052 I
MDP0000231274 Malus domestica MDP0000231274 I
MDP0000239688 Malus domestica MDP0000239688 I
MDP0000493795 Malus domestica MDP0000493795 I
MDP0000545420 Malus domestica MDP0000545420 I
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I
Pavir.J01411 Panicum virgatum Pavir.J01411 I
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I
PK07494.1 Cannabis sativa PK07494.1 I
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I