CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITC_079280
(
Penicillium italicum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PITC_079280
T194828_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.830
0.857
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KGO65449
GATA
824
858
CAMCNTKNTPEWRRGPSGNRDLCNSCGLRWAKQMR
Links
Other
GATA
family TFs
Other
Penicillium italicum
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla018179
Citrullus lanatus
Cla018179
N
0.000
PK20526.1
Cannabis sativa
PK20526.1
N
0.000
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.000
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.000
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.000
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.000
Carubv10025657m.g
Capsella rubella
Carubv10025657m.g
N
0.000
Cagra.18121s0006
Capsella grandiflora
Cagra.18121s0006
N
0.000
Bostr.23794s0312
Boechera stricta
Bostr.23794s0312
N
0.000
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.000
29767.m000200
Ricinus communis
29767.m000200
N
0.000
Pm002685
Prunus mume
Pm002685
N
0.000
SCL9
Arabidopsis thaliana
AT2G37650
N
0.000
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.000
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.000
TCM_021920
Theobroma cacao
TCM_021920
N
0.000
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.000
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.000
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.000
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.000
fgenesh1_pg.C_scaffold_4001851
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001851
N
0.000
fgenesh1_pg.C_scaffold_4001848
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_4001848
N
0.000
Bra000012
Brassica rapa
Bra000012
N
0.000
Bo3g031890
Brassica oleracea
Bo3g031890
N
0.000