CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10029863.g
(
Linum usitatissimum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Lus10029863.g
T196643_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10029863
GATA
25
65
DGKKLCIDCKTSRTPLWRSGPAGPKSLCNACGIRHRKRRRA
Links
Other
GATA
family TFs
Other
Linum usitatissimum
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB27
Arabidopsis thaliana
AT3G53200
D
AMTR_s01267p00006490
Amborella trichopoda
AMTR_s01267p00006490
I
AtMYB27
Arabidopsis lyrata
fgenesh2_kg.5__1687__AT3G53200.1
I
Aquca_030_00038
Aquilegia coerulea
Aquca_030_00038
I
Bostr.9544s0002
Boechera stricta
Bostr.9544s0002
I
Cagra.0612s0043
Capsella grandiflora
Cagra.0612s0043
I
Carubv10019409m.g
Capsella rubella
Carubv10019409m.g
I
evm.TU.supercontig_92.99
Carica papaya
evm.TU.supercontig_92.99
I
Gorai.004G145800
Gossypium raimondii
Gorai.004G145800
I
GLYMA10G06680
Glycine max
GLYMA10G06680
N
GLYMA13G20880
Glycine max
GLYMA13G20880
N
MTR_1g062940
Medicago truncatula
MTR_1g062940
N
PGSC0003DMG400028282
Solanum tuberosum
PGSC0003DMG400028282
N
Solyc10g083900.1
Solanum lycopersicum
Solyc10g083900.1
N