CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g143710
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo4g143710
T199931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g143710.1
GRAS
45
404
LLSLLLQCAEYVATDHLREASILLSEISETCSPFGSSPERVVAYFAQALQARVISTYLSGACSCSQLSESPIPSQKIFAALQTFNSLSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPGLFHILASRPRKLRSIRITGFGPSSDVLASTGRRLADFAASLSLPFEFRPIVGKIGNVTDPSRLGRRPGEAVVVHWMQHRLYDVTGNGIDALEIVRRLRPNLITMVEQELSYDDGGGGCFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLATEIRNIVGGKRRGVMRWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWQ
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
THAP1
Homo sapiens
ENSG00000131931
D
THAP1
Tursiops truncatus
ENSTTRG00000008823
I
THAP1
Oryctolagus cuniculus
ENSOCUG00000001391
I
THAP1
Otolemur garnettii
ENSOGAG00000002708
I
ENSONIG00000012619
Oreochromis niloticus
ENSONIG00000012619
I
thap1
Oryzias latipes
ENSORLG00000018779
I
ENSPANG00000007346
Papio anubis
ENSPANG00000007346
I
ENSPFOG00000004261
Poecilia formosa
ENSPFOG00000004261
I
ENSPSIG00000017440
Pelodiscus sinensis
ENSPSIG00000017440
I
THAP1
Pan troglodytes
ENSPTRG00000020211
I
THAP1
Pteropus vampyrus
ENSPVAG00000013496
I
Thap1
Rattus norvegicus
ENSRNOG00000056956
I
ENSSSCG00000027223
Sus scrofa
ENSSSCG00000027223
I
ENSSTOG00000023122
Ictidomys tridecemlineatus
ENSSTOG00000023122
I
ENSTSYG00000006585
Tarsius syrichta
ENSTSYG00000006585
I
ENSOARG00000003516
Ovis aries
ENSOARG00000003516
I
THAP1
Vicugna pacos
ENSVPAG00000001157
I
ENSXMAG00000003907
Xiphophorus maculatus
ENSXMAG00000003907
I
Aan_R002310
Calypte anna
Aan_R002310
I
Afo_R005722
Aptenodytes forsteri
Afo_R005722
I
Brh_R003908
Buceros rhinoceros
Brh_R003908
I
ENSBTAP00000010035-D1
Bos grunniens
ENSBTAP00000010035-D1
I
ENSP00000254250
Macaca fascicularis
ENSP00000254250
I
Gfo_R004116
Geospiza fortis
Gfo_R004116
I
Myotis_brandtii_thap1_10030544
Myotis brandtii
Myotis_brandtii_thap1_10030544
I
Pvit_16121
Pogona vitticeps
Pvit_16121
I
Tal_R008759
Tyto alba
Tal_R008759
I
AAH77429
Xenopus laevis
AAH77429
I
thap1
Xenopus tropicalis
XB-GENE-1008758
I
thap1.L
Xenopus laevis
XB-GENE-1008764
I
ENSFALG00000005181
Ficedula albicollis
ENSFALG00000005181
I
ENSAMEG00000004992
Ailuropoda melanoleuca
ENSAMEG00000004992
I
ENSAMXG00000007136
Astyanax mexicanus
ENSAMXG00000007136
I
THAP1
Bos taurus
ENSBTAG00000007629
I
THAP1
Canis familiaris
ENSCAFG00000005418
I
ENSCHOG00000005457
Choloepus hoffmanni
ENSCHOG00000005457
I
ENSCHOG00000005563
Choloepus hoffmanni
ENSCHOG00000005563
I
THAP1
Callithrix jacchus
ENSCJAG00000003466
I
ENSCPOG00000021608
Cavia porcellus
ENSCPOG00000021608
I
ENSCSAG00000014961
Chlorocebus sabaeus
ENSCSAG00000014961
I
THAP1
Dasypus novemcinctus
ENSDNOG00000047233
I
THAP1
Equus caballus
ENSECAG00000000020
I
THAP1
Erinaceus europaeus
ENSEEUG00000003332
I
THAP1
Echinops telfairi
ENSETEG00000018764
I
THAP1
Anolis carolinensis
ENSACAG00000005705
I
THAP1
Felis catus
ENSFCAG00000027837
I
thap1
Gasterosteus aculeatus
ENSGACG00000018371
I
THAP1
Gallus gallus
ENSGALG00000015385
I
THAP1
Gorilla gorilla
ENSGGOG00000022708
I
ENSLACG00000000288
Latimeria chalumnae
ENSLACG00000000288
I
ENSLACG00000003453
Latimeria chalumnae
ENSLACG00000003453
I
THAP1
Loxodonta africana
ENSLAFG00000003647
I
ENSLOCG00000003237
Lepisosteus oculatus
ENSLOCG00000003237
I
THAP1
Myotis lucifugus
ENSMLUG00000003837
I
ENSMMUG00000000162
Macaca mulatta
ENSMMUG00000000162
I
Thap1
Mus musculus
ENSMUSG00000037214
I
ENSNLEG00000012946
Nomascus leucogenys
ENSNLEG00000012946
I
THAP1
Ornithorhynchus anatinus
ENSOANG00000000699
I