CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla003996
(
Citrullus lanatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cla003996
T201907_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla003996
GRAS
218
577
LVHALMACAEAVQQNDLNLAEALVKRIGYLAISQAGAMRKVATFFAEALARRIYRLRPENPLDHSVSDRLQMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNRGMQWPALIQALALRPNGPPAFRLTGIGPPAPDNSDYLQEVGWKLAELAEAIHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGALEKVLSVVKQMKPEIITVVEQEANHNGPVFVDRFTESLHYYSTLFDSLEGSPNNQDKIMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFEPIHLGSNAFKQASMLLALFGSGEGYQVEENNGSLMLGWHTRPLIATSAWK
Links
Other
GRAS
family TFs
Other
Citrullus lanatus
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI008544
Acyrthosiphon pisum
ACYPI008544
N
0.000
Bo4g196010
Brassica oleracea
Bo4g196010
N
0.000
Bra039294
Brassica rapa
Bra039294
N
0.000
TCM_005304
Theobroma cacao
TCM_005304
N
0.000
VIT_02s0025g00040
Vitis vinifera
VIT_02s0025g00040
N
0.000
Cagra.0050s0094
Capsella grandiflora
Cagra.0050s0094
N
0.000
Carubv10022904m.g
Capsella rubella
Carubv10022904m.g
N
0.000
evm.TU.supercontig_1258.5
Carica papaya
evm.TU.supercontig_1258.5
N
0.000
Gorai.001G168400
Gossypium raimondii
Gorai.001G168400
N
0.000
Gorai.008G120900
Gossypium raimondii
Gorai.008G120900
N
0.000