CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000884524
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000884524
T202915_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000884524
GRAS
126
504
LVHLLIAAAEALTGAYKSRDLARVILVRLKELVSPTDGSNMERLAAYYTEALQGLLEGTGGLLGKHLIGSGAHRNHGHHPMDVTVAFQLLQDMSPYVKFGHFTANQAILEAVVHERRIHVVDYDIMEGIQWASLMQALVSRKEGPPTPLLRITALSRGGSRRQSIGTVQETGRRLTEFAASIGQPFSFHQCRLGSDETFQPSALKLIKGETLVINCMLNLPHFSYRSPDSIASFLSGAKTLSPRLVTLVEEDVRSTWDGGFVARFMDSLYHYSAVYDSLEAGFPMQSRARALVERVFLGPRIVGSLAHIYRAHGEVGHSWRERLGAVGFKPIPISFANHCQAKLLLGLFNDGYRVEEVTNHRLVLGWKSRCLLSASIWT
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA029518
Oryza indica
BGIOSGA029518
N
0.000
OBART09G15000
Oryza barthii
OBART09G15000
N
0.000
OGLUM09G15640
Oryza glumaepatula
OGLUM09G15640
N
0.000
OMERI09G11680
Oryza meridionalis
OMERI09G11680
N
0.000
ONIVA09G15620
Oryza nivara
ONIVA09G15620
N
0.000
OPUNC09G13450
Oryza punctata
OPUNC09G13450
N
0.000
ORGLA09G0115600
Oryza glaberrima
ORGLA09G0115600
N
0.000
ORUFI09G16180
Oryza rufipogon
ORUFI09G16180
N
0.000
OS09G0493700
Oryza sativa
OS09G0493700
N
0.000
Pm001136
Prunus mume
Pm001136
N
0.000
Pm001156
Prunus mume
Pm001156
N
0.000
29657.m000463
Ricinus communis
29657.m000463
N
0.000
Ciclev10033436m.g
Citrus clementina
Ciclev10033436m.g
N
0.000
gene12168-v1.0-hybrid
Fragaria vesca
gene12168-v1.0-hybrid
N
0.000
gene28487-v1.0-hybrid
Fragaria vesca
gene28487-v1.0-hybrid
N
0.000
orange1.1g038876m.g
Citrus sinensis
orange1.1g038876m.g
N
0.000