Pavir.Bb03100 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Bb03100 T202975_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03100.1.p GRAS 70 443

Links

Other GRAS family TFs
Other Panicum virgatum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.710
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N 0.793
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.738
Ca_11130 Cicer arietinum Ca_11130 N 0.713
Cla005525 Citrullus lanatus Cla005525 N 0.718
Pm014866 Prunus mume Pm014866 N 0.738
29872.m000537 Ricinus communis 29872.m000537 N 0.724
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.732
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.721
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.702
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.746
TCM_002021 Theobroma cacao TCM_002021 N 0.729
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.732
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.703
MDP0000269044 Malus domestica MDP0000269044 N 0.721
MDP0000287321 Malus domestica MDP0000287321 N 0.732
MDP0000289554 Malus domestica MDP0000289554 N 0.721
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.913
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.735
PK21090.1 Cannabis sativa PK21090.1 N 0.732
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.727
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.898
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.843
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.704
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.920
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.873
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.834
OBART07G19080 Oryza barthii OBART07G19080 N 0.878
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.898
OLONG_002258 Oryza longistaminata OLONG_002258 N 0.785
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.895
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.898
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.898
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.898
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.898
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.898
OS07G0567700 Oryza sativa OS07G0567700 N 0.898
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.732
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.735
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.738
Si032551m.g Setaria italica Si032551m.g N 0.956