Pavir.J08330 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J08330 T203046_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J08330.1.p GRAS 318 684

Links

Other GRAS family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.728
Pavir.J38998 Panicum virgatum Pavir.J38998 N 0.812
Pavir.J28748 Panicum virgatum Pavir.J28748 N 0.809
Pavir.J10950 Panicum virgatum Pavir.J10950 N 0.831
Traes_5DS_C06FE6037 Triticum aestivum Traes_5DS_C06FE6037 N 0.706
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.737
Traes_5BS_ED54C58C5 Triticum aestivum Traes_5BS_ED54C58C5 N 0.712
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.775
Traes_4AL_977AF4963 Triticum aestivum Traes_4AL_977AF4963 N 0.712
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.786
OS12G0573200 Oryza sativa OS12G0573200 N 0.728
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.766
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.728
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.728
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.725
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.728
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.730
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.725
OBART12G16530 Oryza barthii OBART12G16530 N 0.728
OB12G23410 Oryza brachyantha OB12G23410 N 0.712
MLOC_21297 Hordeum vulgare MLOC_21297 N 0.744
GRMZM2G179325 Zea mays GRMZM2G179325 N 0.786
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.767
F775_32974 Aegilops tauschii F775_32974 N 0.706
BRADI4G03867 Brachypodium distachyon BRADI4G03867 N 0.720