BLH11 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Al_scaffold_0002_2247 T204354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.813 0.653
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.636 0.592
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.611 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.611 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.611 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.611 0.429
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.600 0.429
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.600 0.408
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.600 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0002_2247 Homeodomain 211 262

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

1218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.000
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.000
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.000
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.000
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.000
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.000
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.000
Kwal_9519 Kluyveromyces waltii Kwal_9519 N 0.000
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.000
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.000
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.000
sr12520 Sporisorium reilianum sr12520 N 0.000
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.000
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.000
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.000
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.000
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.000
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.000
Moror_8439 Moniliophthora roreri Moror_8439 N 0.000
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.000
M378DRAFT_41557 Amanita muscaria M378DRAFT_41557 N 0.000
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N 0.000
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.000
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N 0.000
KLLA0_B11495g Kluyveromyces lactis KLLA0_B11495g N 0.000
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.000
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.000
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.000
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.000
HelroG178674 Helobdella robusta HelroG178674 N 0.000
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.000
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.000