PRH (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT4G29940 T204509_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.696 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G29940.1 Homeodomain 454 509
AT4G29940.2 Homeodomain 454 509

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCOI00608900 Haemonchus contortus HCOI00608900 N
TELCIR_25960 Teladorsagia circumcincta TELCIR_25960 N
TELCIR_08212 Teladorsagia circumcincta TELCIR_08212 N
OESDEN_19099 Oesophagostomum dentatum OESDEN_19099 N
NECAME_16739 Necator americanus NECAME_16739 N
NBR_0001294901 Nippostrongylus brasiliensis NBR_0001294901 N
MhA1_Contig239.frz3.gene35 Meloidogyne hapla MhA1_Contig239.frz3.gene35 N
HPLM_0001001001 Haemonchus placei HPLM_0001001001 N
HPBE_0000407401 Heligmosomoides bakeri HPBE_0000407401 N
CBG19687 Caenorhabditis briggsae CBG19687 N
HCOI00506400 Haemonchus contortus HCOI00506400 N
DICVIV_11664 Dictyocaulus viviparus DICVIV_11664 N
ANCDUO_14679 Ancylostoma duodenale ANCDUO_14679 N
ANCCEY_10735 Ancylostoma ceylanicum ANCCEY_10735 N
ANCCAN_06410 Ancylostoma caninum ANCCAN_06410 N
rps-13 Caenorhabditis elegans WBGene00004482 N
CRE03166 Caenorhabditis remanei CRE03166 N
CJA02893 Caenorhabditis japonica CJA02893 N