pdm3 (Drosophila melanogaster)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00157 (Pou) IPR000327 FBgn0261588 T218409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pdm3
M02127_2.00		 Drosophila melanogaster
CTAATTAN
NTAATTAG		 PBM
Weirauch et al.(2014)
pTH6769		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.703 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02127_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0292044 POU 813 902
FBpp0292044 Homeodomain 928 984
FBpp0292045 POU 1110 1199
FBpp0292045 Homeodomain 1225 1281
FBpp0308445 POU 1110 1181
FBpp0308445 Homeodomain 1207 1263
FBpp0308446 Homeodomain 1226 1282

Links

Other Homeodomain family TFs
Other Drosophila melanogaster TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP5 Arabidopsis thaliana AT1G10480 D 0.000
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.000
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.000
Carubv10003685m.g Capsella rubella Carubv10003685m.g I 0.000
Carubv10002570m.g Capsella rubella Carubv10002570m.g I 0.000
Cagra.1504s0017 Capsella grandiflora Cagra.1504s0017 I 0.000
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I 0.000
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.000
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.000
e_gw1.34.233.1 Physcomitrella patens e_gw1.34.233.1 I 0.000
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.000
cassava44297.m1 Manihot esculenta cassava44297.m1 I 0.000
30045.m000471 Ricinus communis 30045.m000471 I 0.000
Pm008291 Prunus mume Pm008291 I 0.000
Ca_08116 Cicer arietinum Ca_08116 I 0.000
VIT_08s0040g00750 Vitis vinifera VIT_08s0040g00750 I 0.000
TRIUR3_34498 Triticum urartu TRIUR3_34498 I 0.000
TRIUR3_22340 Triticum urartu TRIUR3_22340 I 0.000
Traes_5DL_DD8A0F6BE Triticum aestivum Traes_5DL_DD8A0F6BE I 0.000
Traes_5DL_B97546DA11 Triticum aestivum Traes_5DL_B97546DA11 I 0.000
Traes_5BL_3E6B0CD61 Triticum aestivum Traes_5BL_3E6B0CD61 I 0.000
Traes_5AL_81EFE5211 Triticum aestivum Traes_5AL_81EFE5211 I 0.000
TCM_044725 Theobroma cacao TCM_044725 I 0.000
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.000
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.000
Pavir.Bb02239 Panicum virgatum Pavir.Bb02239 I 0.000
AMTR_s00022p00165560 Amborella trichopoda AMTR_s00022p00165560 I 0.000
PK10012.1 Cannabis sativa PK10012.1 I 0.000
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I 0.000
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.000
Pavir.J36164 Panicum virgatum Pavir.J36164 I 0.000
Pavir.Ib01877 Panicum virgatum Pavir.Ib01877 I 0.000
Pavir.Ib01803 Panicum virgatum Pavir.Ib01803 I 0.000
Pavir.Ib01788 Panicum virgatum Pavir.Ib01788 I 0.000
Pavir.Ia03263 Panicum virgatum Pavir.Ia03263 I 0.000
Pavir.Ia03096 Panicum virgatum Pavir.Ia03096 I 0.000
Pavir.Ha01090 Panicum virgatum Pavir.Ha01090 I 0.000
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.000
orange1.1g046965m.g Citrus sinensis orange1.1g046965m.g I 0.000
MDP0000165710 Malus domestica MDP0000165710 I 0.000
MDP0000121370 Malus domestica MDP0000121370 I 0.000
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.000
gene05263-v1.0-hybrid Fragaria vesca gene05263-v1.0-hybrid I 0.000
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.000
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.000
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.000
evm.TU.supercontig_116.88 Carica papaya evm.TU.supercontig_116.88 I 0.000
Ciclev10003844m.g Citrus clementina Ciclev10003844m.g I 0.000
F775_42450 Aegilops tauschii F775_42450 I 0.000
LPERR08G07840 Leersia perrieri LPERR08G07840 I 0.000
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.000
GRMZM2G403590 Zea mays GRMZM2G403590 I 0.000
GRMZM2G161255 Zea mays GRMZM2G161255 I 0.000
GRMZM2G115388 Zea mays GRMZM2G115388 I 0.000
GRMZM2G108818 Zea mays GRMZM2G108818 I 0.000
GRMZM2G037574 Zea mays GRMZM2G037574 I 0.000
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.000
GLYMA06G14783 Glycine max GLYMA06G14783 I 0.000
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.000
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.000
LPERR09G07930 Leersia perrieri LPERR09G07930 I 0.000
F775_01070 Aegilops tauschii F775_01070 I 0.000
BRADI4G37760 Brachypodium distachyon BRADI4G37760 I 0.000
BRADI4G30920 Brachypodium distachyon BRADI4G30920 I 0.000
Bra028724 Brassica rapa Bra028724 I 0.000
Bra008787 Brassica rapa Bra008787 I 0.000
Bo9g166240 Brassica oleracea Bo9g166240 I 0.000
Bo9g011450 Brassica oleracea Bo9g011450 I 0.000
Bo8g109510 Brassica oleracea Bo8g109510 I 0.000
Bo2g007320 Brassica oleracea Bo2g007320 I 0.000
BGIOSGA029710 Oryza indica BGIOSGA029710 I 0.000
GIS2 Arabidopsis thaliana AT5G06650 I 0.000
ORUFI09G12050 Oryza rufipogon ORUFI09G12050 I 0.000
Si031489m.g Setaria italica Si031489m.g I 0.000
Si028367m.g Setaria italica Si028367m.g I 0.000
SELMODRAFT_450839 Selaginella moellendorffii SELMODRAFT_450839 I 0.000
SELMODRAFT_450832 Selaginella moellendorffii SELMODRAFT_450832 I 0.000
SELMODRAFT_450813 Selaginella moellendorffii SELMODRAFT_450813 I 0.000
SELMODRAFT_405785 Selaginella moellendorffii SELMODRAFT_405785 I 0.000
Sb02g025390 Sorghum bicolor Sb02g025390 I 0.000
Sb01g034110 Sorghum bicolor Sb01g034110 I 0.000
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.000
OS09G0431900 Oryza sativa OS09G0431900 I 0.000
Si037914m.g Setaria italica Si037914m.g I 0.000
ORGLA09G0084000 Oryza glaberrima ORGLA09G0084000 I 0.000
OPUNC09G09720 Oryza punctata OPUNC09G09720 I 0.000
ONIVA09G10990 Oryza nivara ONIVA09G10990 I 0.000
OMERI09G08780 Oryza meridionalis OMERI09G08780 I 0.000
OLONG_006424 Oryza longistaminata OLONG_006424 I 0.000
OGLUM09G11630 Oryza glumaepatula OGLUM09G11630 I 0.000
OBART09G11250 Oryza barthii OBART09G11250 I 0.000
OB09G17800 Oryza brachyantha OB09G17800 I 0.000
MLOC_4507 Hordeum vulgare MLOC_4507 I 0.000
Ca_23376 Cicer arietinum Ca_23376 N 0.000
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.000