GSMUA_Achr6G26980_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr6G26980_001 T219190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.668 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P26980_001 Homeodomain 20 76

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10022636.g Linum usitatissimum Lus10022636.g N 0.000
Carubv10014350m.g Capsella rubella Carubv10014350m.g N 0.000
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N 0.000
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N 0.000
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N 0.000
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N 0.000
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N 0.000
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N 0.000
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N 0.000
Lus10003333.g Linum usitatissimum Lus10003333.g N 0.000
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N 0.000
Lus10023966.g Linum usitatissimum Lus10023966.g N 0.000
Lus10025118.g Linum usitatissimum Lus10025118.g N 0.000
MDP0000480581 Malus domestica MDP0000480581 N 0.000
MDP0000868556 Malus domestica MDP0000868556 N 0.000
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N 0.000
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N 0.000
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N 0.000
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N 0.000
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N 0.000
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N 0.000
Bo3g092020 Brassica oleracea Bo3g092020 N 0.000
Bo7g015050 Brassica oleracea Bo7g015050 N 0.000
Bra002018 Brassica rapa Bra002018 N 0.000
Bra013034 Brassica rapa Bra013034 N 0.000
anac036 Arabidopsis lyrata fgenesh2_kg.3__3291__AT2G17040.1 N 0.000
GLYMA11G10230 Glycine max GLYMA11G10230 N 0.000
GLYMA12G02540 Glycine max GLYMA12G02540 N 0.000
MTR_4g075980 Medicago truncatula MTR_4g075980 N 0.000
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N 0.000
anac036 Arabidopsis thaliana AT2G17040 N 0.000
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N 0.000
TCM_006499 Theobroma cacao TCM_006499 N 0.000
Pm020961 Prunus mume Pm020961 N 0.000
29797.m000353 Ricinus communis 29797.m000353 N 0.000
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N 0.000
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N 0.000
mgf013168m Mimulus guttatus mgf013168m N 0.000
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N 0.000