CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400020785
(
Solanum tuberosum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PGSC0003DMG400020785
T222193_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400053577
Homeodomain
264
317
SAQKRLKKVQLETLEQVYRRSKRPTNAMISSIVHVTNVPRKRVLKWFEDRRSEE
Links
Other
Homeodomain
family TFs
Other
Solanum tuberosum
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
irf5.L
Xenopus laevis
XB-GENE-998629
D
IRF5
Oryctolagus cuniculus
ENSOCUG00000010101
D
IRF6
Gallus gallus
ENSGALG00000001405
D
Irf5
Mus musculus
ENSMUSG00000029771
D
IRF5
Homo sapiens
ENSG00000128604
D
IRF6
Meleagris gallopavo
ENSMGAG00000004431
D
ENSSTOG00000004858
Ictidomys tridecemlineatus
ENSSTOG00000004858
I
ENSONIG00000007600
Oreochromis niloticus
ENSONIG00000007600
I
IRF5
Sus scrofa
ENSSSCG00000016573
I
IRF6
Sus scrofa
ENSSSCG00000015612
I
ENSSHAG00000006683
Sarcophilus harrisii
ENSSHAG00000006683
I
Irf5
Rattus norvegicus
ENSRNOG00000007437
I
IRF5
Pteropus vampyrus
ENSPVAG00000015756
I
IRF5
Pan troglodytes
ENSPTRG00000019675
I
ENSPSIG00000003597
Pelodiscus sinensis
ENSPSIG00000003597
I
ENSPPYG00000017989
Pongo abelii
ENSPPYG00000017989
I
ENSPFOG00000013528
Poecilia formosa
ENSPFOG00000013528
I
ENSPANG00000018384
Papio anubis
ENSPANG00000018384
I
IRF5
Ochotona princeps
ENSOPRG00000006148
I
ENSOARG00000003908
Ovis aries
ENSOARG00000003908
I
Cmyd_10002838
Chelonia mydas
Cmyd_10002838
I
irf5
Xenopus tropicalis
XB-GENE-998624
I
irf6.S
Xenopus laevis
XB-GENE-876421
I
irf6.2.L
Xenopus laevis
XB-GENE-5910427
I
Pvit_15428
Pogona vitticeps
Pvit_15428
I
Pvit_14327
Pogona vitticeps
Pvit_14327
I
Myotis_brandtii_IRF5_10012830
Myotis brandtii
Myotis_brandtii_IRF5_10012830
I
ENSP00000349770
Macaca fascicularis
ENSP00000349770
I
ENSP00000349770-D1
Bos grunniens
ENSP00000349770-D1
I
IRF6
Taeniopygia guttata
ENSTGUG00000001485
I
Alligator_sinensis_CCG015719.1
Alligator sinensis
Alligator_sinensis_CCG015719.1
I
Alligator_sinensis_CCG004564.1
Alligator sinensis
Alligator_sinensis_CCG004564.1
I
Alligator_sinensis_CCG003696.1
Alligator sinensis
Alligator_sinensis_CCG003696.1
I
Afo_R001981
Aptenodytes forsteri
Afo_R001981
I
ENSXMAG00000013056
Xiphophorus maculatus
ENSXMAG00000013056
I
irf5
Takifugu rubripes
ENSTRUG00000000641
I
irf5
Tetraodon nigroviridis
ENSTNIG00000003346
I
IRF5
Gorilla gorilla
ENSGGOG00000012013
I
ENSAPLG00000006203
Anas platyrhynchos
ENSAPLG00000006203
I
ENSAPLG00000009319
Anas platyrhynchos
ENSAPLG00000009319
I
IRF5
Bos taurus
ENSBTAG00000004989
I
IRF5
Canis familiaris
ENSCAFG00000001611
I
IRF5
Callithrix jacchus
ENSCJAG00000018061
I
IRF5
Cavia porcellus
ENSCPOG00000000246
I
ENSCSAG00000009970
Chlorocebus sabaeus
ENSCSAG00000009970
I
irf5
Danio rerio
ENSDARG00000045681
I
IRF5
Dasypus novemcinctus
ENSDNOG00000013370
I
Irf5
Dipodomys ordii
ENSDORG00000010627
I
IRF5
Equus caballus
ENSECAG00000009902
I
IRF5
Echinops telfairi
ENSETEG00000002100
I
ENSFALG00000000504
Ficedula albicollis
ENSFALG00000000504
I
IRF5
Felis catus
ENSFCAG00000000956
I
irf5
Gasterosteus aculeatus
ENSGACG00000000695
I
IRF5
Otolemur garnettii
ENSOGAG00000009608
I
ENSGMOG00000007264
Gadus morhua
ENSGMOG00000007264
I
ENSLACG00000005750
Latimeria chalumnae
ENSLACG00000005750
I
ENSLACG00000018600
Latimeria chalumnae
ENSLACG00000018600
I
IRF5
Loxodonta africana
ENSLAFG00000021568
I
ENSLOCG00000015563
Lepisosteus oculatus
ENSLOCG00000015563
I
ENSMEUG00000002435
Macropus eugenii
ENSMEUG00000002435
I
IRF5
Microcebus murinus
ENSMICG00000000138
I
IRF5
Myotis lucifugus
ENSMLUG00000001406
I
IRF5
Macaca mulatta
ENSMMUG00000018478
I
IRF5
Monodelphis domestica
ENSMODG00000014710
I
ENSMPUG00000006034
Mustela putorius furo
ENSMPUG00000006034
I
ENSNLEG00000012454
Nomascus leucogenys
ENSNLEG00000012454
I
IRF5
Ornithorhynchus anatinus
ENSOANG00000011449
I
ENSAMEG00000005109
Ailuropoda melanoleuca
ENSAMEG00000005109
I