PGSC0003DMG400020785 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG400020785 T222193_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400053577 Homeodomain 264 317

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.833
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.753
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.749
MDP0000202143 Malus domestica MDP0000202143 N 0.746
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.725
Pm004594 Prunus mume Pm004594 N 0.725
MDP0000119866 Malus domestica MDP0000119866 N 0.725
Bo9g171420 Brassica oleracea Bo9g171420 N 0.689
Bra008975 Brassica rapa Bra008975 N 0.689
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.689
OCP3 Arabidopsis thaliana AT5G11270 N 0.679
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.679
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.679
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.679
TCM_038389 Theobroma cacao TCM_038389 N 0.666
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.666
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.666
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.664
PK00680.1 Cannabis sativa PK00680.1 N 0.660
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.657
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.657
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.657
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.657
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.655
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.655
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.653
OB06G27850 Oryza brachyantha OB06G27850 N 0.653
OBART06G20210 Oryza barthii OBART06G20210 N 0.653
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.653
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.653
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.653
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.653
OS06G0601000 Oryza sativa OS06G0601000 N 0.653
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.639
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.639
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.636
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.636
Cla021272 Citrullus lanatus Cla021272 N 0.633
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.633
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.628
Ca_01772 Cicer arietinum Ca_01772 N 0.628
MTR_3g107530 Medicago truncatula MTR_3g107530 N 0.625
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.621
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.621
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.620
29848.m004652 Ricinus communis 29848.m004652 N 0.620
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.620
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.610
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.610