MDP0000119866 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000119866 T228962_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000119866 Homeodomain 277 330

Links

Other Homeodomain family TFs
Other Malus domestica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000202143 Malus domestica MDP0000202143 N 0.846
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.842
Pm004594 Prunus mume Pm004594 N 0.842
TCM_038389 Theobroma cacao TCM_038389 N 0.774
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.774
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.751
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.732
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.729
29848.m004652 Ricinus communis 29848.m004652 N 0.728
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.727
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.725
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.715
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.715
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.707
Cla021272 Citrullus lanatus Cla021272 N 0.696
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.696
OCP3 Arabidopsis thaliana AT5G11270 N 0.691
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.691
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.691
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.691
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.691
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.691
PK00680.1 Cannabis sativa PK00680.1 N 0.691
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.684
Bo9g171420 Brassica oleracea Bo9g171420 N 0.681
Bra008975 Brassica rapa Bra008975 N 0.681
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.681
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.678
OB06G27850 Oryza brachyantha OB06G27850 N 0.671
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.664
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.657
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.657
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.653
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.653
mgf000632m Mimulus guttatus mgf000632m N 0.652
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.651
OBART06G20210 Oryza barthii OBART06G20210 N 0.651
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.651
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.651
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.651
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.651
OS06G0601000 Oryza sativa OS06G0601000 N 0.651
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.641
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.630
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.630
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.630
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.630
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.618
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.616