OMERI06G20820 (Oryza meridionalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OMERI06G20820 T221589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI06G20820.1 Homeodomain 305 358
OMERI06G20820.2 Homeodomain 246 299
OMERI06G20820.3 Homeodomain 244 297

Links

Other Homeodomain family TFs
Other Oryza meridionalis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.810
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.808
OBART06G20210 Oryza barthii OBART06G20210 N 0.808
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.808
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.808
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.808
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.808
OS06G0601000 Oryza sativa OS06G0601000 N 0.808
OB06G27850 Oryza brachyantha OB06G27850 N 0.791
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.773
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.766
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.761
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.761
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.761
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.761
Sb10g023400 Sorghum bicolor Sb10g023400 N 0.716
Pavir.Da00552 Panicum virgatum Pavir.Da00552 N 0.716
Pavir.Db01233 Panicum virgatum Pavir.Db01233 N 0.716
GRMZM2G163641 Zea mays GRMZM2G163641 N 0.708
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.692
TCM_038389 Theobroma cacao TCM_038389 N 0.670
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.670
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.668
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.662
LPERR06G16850 Leersia perrieri LPERR06G16850 N 0.655
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.655
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.653
Pm004594 Prunus mume Pm004594 N 0.653
MDP0000119866 Malus domestica MDP0000119866 N 0.653
PK00680.1 Cannabis sativa PK00680.1 N 0.648
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.645
MDP0000202143 Malus domestica MDP0000202143 N 0.641
Cla021272 Citrullus lanatus Cla021272 N 0.637
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.637
Bo9g171420 Brassica oleracea Bo9g171420 N 0.627
Bra008975 Brassica rapa Bra008975 N 0.627
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.627
29848.m004652 Ricinus communis 29848.m004652 N 0.625
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.625
mgf000632m Mimulus guttatus mgf000632m N 0.624
OCP3 Arabidopsis thaliana AT5G11270 N 0.616
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.616
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.616
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.616
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.611
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.611
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.603
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.603