CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G163641
(
Zea mays
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GRMZM2G163641
T219033_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G163641_P01
Homeodomain
254
307
SARKRLKKVQLETLERVYLRSKRPTNTMVSSIVQVTNLPRKTIVKWFEDRREQD
Links
Other
Homeodomain
family TFs
Other
Zea mays
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb10g023400
Sorghum bicolor
Sb10g023400
N
0.859
Pavir.Da00552
Panicum virgatum
Pavir.Da00552
N
0.859
Pavir.Db01233
Panicum virgatum
Pavir.Db01233
N
0.859
OPUNC06G18430
Oryza punctata
OPUNC06G18430
N
0.765
BGIOSGA023211
Oryza indica
BGIOSGA023211
N
0.763
OB06G27850
Oryza brachyantha
OB06G27850
N
0.763
OBART06G20210
Oryza barthii
OBART06G20210
N
0.763
OGLUM06G21270
Oryza glumaepatula
OGLUM06G21270
N
0.763
OLONG_013537
Oryza longistaminata
OLONG_013537
N
0.763
ONIVA06G23990
Oryza nivara
ONIVA06G23990
N
0.763
ORUFI06G21620
Oryza rufipogon
ORUFI06G21620
N
0.763
OS06G0601000
Oryza sativa
OS06G0601000
N
0.763
BRADI1G58817
Brachypodium distachyon
BRADI1G58817
N
0.754
MLOC_45474
Hordeum vulgare
MLOC_45474
N
0.734
Traes_7AL_0FFE02C4C
Triticum aestivum
Traes_7AL_0FFE02C4C
N
0.734
Traes_7BL_E2E7AA383
Triticum aestivum
Traes_7BL_E2E7AA383
N
0.734
Traes_7DL_613F5240E
Triticum aestivum
Traes_7DL_613F5240E
N
0.734
BRADI1G36770
Brachypodium distachyon
BRADI1G36770
N
0.731
Si006856m.g
Setaria italica
Si006856m.g
N
0.720
mgf000632m
Mimulus guttatus
mgf000632m
N
0.709
OMERI06G20820
Oryza meridionalis
OMERI06G20820
N
0.708
LPERR06G16850
Leersia perrieri
LPERR06G16850
N
0.643
MTR_3g107530
Medicago truncatula
MTR_3g107530
N
0.630
POPTR_0006s26790
Populus trichocarpa
POPTR_0006s26790
N
0.625
evm.TU.supercontig_115.10
Carica papaya
evm.TU.supercontig_115.10
N
0.607