OB06G27850 (Oryza brachyantha)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OB06G27850 T221263_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB06G27850.1 Homeodomain 244 297

Links

Other Homeodomain family TFs
Other Oryza brachyantha TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.848
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.846
OBART06G20210 Oryza barthii OBART06G20210 N 0.846
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.846
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.846
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.846
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.846
OS06G0601000 Oryza sativa OS06G0601000 N 0.846
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.820
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.816
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.816
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.816
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.816
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.813
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.791
Sb10g023400 Sorghum bicolor Sb10g023400 N 0.771
Pavir.Da00552 Panicum virgatum Pavir.Da00552 N 0.771
Pavir.Db01233 Panicum virgatum Pavir.Db01233 N 0.771
GRMZM2G163641 Zea mays GRMZM2G163641 N 0.763
LPERR06G16850 Leersia perrieri LPERR06G16850 N 0.710
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.690
TCM_038389 Theobroma cacao TCM_038389 N 0.688
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.688
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.687
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.672
Pm004594 Prunus mume Pm004594 N 0.672
MDP0000119866 Malus domestica MDP0000119866 N 0.671
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.663
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.660
MDP0000202143 Malus domestica MDP0000202143 N 0.660
Cla021272 Citrullus lanatus Cla021272 N 0.656
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.656
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.653
PK00680.1 Cannabis sativa PK00680.1 N 0.650
29848.m004652 Ricinus communis 29848.m004652 N 0.644
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.643
mgf000632m Mimulus guttatus mgf000632m N 0.643
OCP3 Arabidopsis thaliana AT5G11270 N 0.635
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.635
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.635
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.635
Si006856m.g Setaria italica Si006856m.g N 0.632
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.629
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.629
Bo9g171420 Brassica oleracea Bo9g171420 N 0.625
Bra008975 Brassica rapa Bra008975 N 0.625
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.625
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.622
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.622
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.609
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.606
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.606
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.600
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.600