TCM_038389 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_038389 T223940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY31458 Homeodomain 247 300

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.822
29848.m004652 Ricinus communis 29848.m004652 N 0.821
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.820
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.790
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.774
Pm004594 Prunus mume Pm004594 N 0.774
MDP0000119866 Malus domestica MDP0000119866 N 0.774
MDP0000202143 Malus domestica MDP0000202143 N 0.762
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.732
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.732
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.724
Cla021272 Citrullus lanatus Cla021272 N 0.713
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.713
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.708
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.708
PK00680.1 Cannabis sativa PK00680.1 N 0.708
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.701
OCP3 Arabidopsis thaliana AT5G11270 N 0.692
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.692
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.692
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.692
OB06G27850 Oryza brachyantha OB06G27850 N 0.688
Bo9g171420 Brassica oleracea Bo9g171420 N 0.682
Bra008975 Brassica rapa Bra008975 N 0.682
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.682
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.679
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.676
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.673
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.670
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.670
mgf000632m Mimulus guttatus mgf000632m N 0.669
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.668
OBART06G20210 Oryza barthii OBART06G20210 N 0.668
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.668
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.668
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.668
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.668
OS06G0601000 Oryza sativa OS06G0601000 N 0.668
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.666
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.665
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.658
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.658
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.642
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.638
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.638
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.638
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.638
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.635
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.633
POPTR_0006s26790 Populus trichocarpa POPTR_0006s26790 N 0.605