CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000079m.g
(
Setaria italica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Si000079m.g
T223165_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000079m
Homeodomain
74
130
KRPRDLLNPKAVKCMQSLFALKDTIGKKETREISLLCGVTVTQVREFFTCQKSRVRK
Links
Other
Homeodomain
family TFs
Other
Setaria italica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00057p00206030
Amborella trichopoda
AMTR_s00057p00206030
N
0.615
GRMZM2G106613
Zea mays
GRMZM2G106613
N
0.847
GSMUA_Achr1G11230_001
Musa acuminata
GSMUA_Achr1G11230_001
N
0.610
Sb03g045030
Sorghum bicolor
Sb03g045030
N
0.848
Ca_00942
Cicer arietinum
Ca_00942
N
0.809
mgf010586m
Mimulus guttatus
mgf010586m
N
0.785
evm.TU.supercontig_9.189
Carica papaya
evm.TU.supercontig_9.189
N
0.730
Lus10009816.g
Linum usitatissimum
Lus10009816.g
N
0.727
Lus10040921.g
Linum usitatissimum
Lus10040921.g
N
0.727
Pavir.Ea03823
Panicum virgatum
Pavir.Ea03823
N
0.853
Pavir.Eb03820
Panicum virgatum
Pavir.Eb03820
N
0.853