Ca_12172 (Cicer arietinum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ca_12172 T225447_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZHD7
M02155_2.00 		Oryza sativa
NNWAANNNNN
NNNNNTTWNN		 PBM
Weirauch et al.(2014)
pTH6076 		0.630 0.600
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_12172 Homeodomain 135 193

Links

Other Homeodomain family TFs
Other Cicer arietinum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N 0.000
Pavir.J38998 Panicum virgatum Pavir.J38998 N 0.000
Pavir.J28748 Panicum virgatum Pavir.J28748 N 0.000
Pavir.J10950 Panicum virgatum Pavir.J10950 N 0.000
Pavir.J08330 Panicum virgatum Pavir.J08330 N 0.000
TRIUR3_22881 Triticum urartu TRIUR3_22881 N 0.000
Traes_5DS_C06FE6037 Triticum aestivum Traes_5DS_C06FE6037 N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000
Traes_5BS_ED54C58C5 Triticum aestivum Traes_5BS_ED54C58C5 N 0.000
Traes_5AS_710247B67 Triticum aestivum Traes_5AS_710247B67 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
TRAES3BF026400020CFD_g Triticum aestivum TRAES3BF026400020CFD_g N 0.000
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.000
OS12G0573200 Oryza sativa OS12G0573200 N 0.000
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.000
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.000
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.000
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.000
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.000
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.000
ONIVA11G23190 Oryza nivara ONIVA11G23190 N 0.000
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.000
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.000
OBART12G16530 Oryza barthii OBART12G16530 N 0.000
OBART11G23670 Oryza barthii OBART11G23670 N 0.000
OB12G23410 Oryza brachyantha OB12G23410 N 0.000
MLOC_21297 Hordeum vulgare MLOC_21297 N 0.000
GRMZM2G159475 Zea mays GRMZM2G159475 N 0.000
F775_32974 Aegilops tauschii F775_32974 N 0.000
BRADI4G03867 Brachypodium distachyon BRADI4G03867 N 0.000