CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29811.m000540
(
Ricinus communis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
29811.m000540
T226977_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29811.m000540
Homeodomain
34
107
NTKRILKTPAQIMALEKFYNVMLVIMFLKGKFLAFSPEHNYPTEEMKSEVAEKIGLTEKQVSSWFCHRRLKDKN
Links
Other
Homeodomain
family TFs
Other
Ricinus communis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
M378DRAFT_6115
Amanita muscaria
M378DRAFT_6115
I
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
fgenesh1_pg.C_scaffold_18000061
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_18000061
I
SERLA73DRAFT_63698
Serpula lacrymans
SERLA73DRAFT_63698
I
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
SCLCIDRAFT_1207253
Scleroderma citrinum
SCLCIDRAFT_1207253
I
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
PISMIDRAFT_58693
Pisolithus microcarpus
PISMIDRAFT_58693
I
PHLGIDRAFT_79048
Phlebiopsis gigantea
PHLGIDRAFT_79048
I
PHACADRAFT_169221
Phanerochaete carnosa
PHACADRAFT_169221
I
PAXRUDRAFT_128990
Paxillus rubicundulus
PAXRUDRAFT_128990
I
PAXINDRAFT_86770
Paxillus involutus
PAXINDRAFT_86770
I
Moror_4577
Moniliophthora roreri
Moror_4577
I
M413DRAFT_20449
Hebeloma cylindrosporum
M413DRAFT_20449
I
M404DRAFT_57116
Pisolithus tinctorius
M404DRAFT_57116
I
AGABI2DRAFT_189243
Agaricus bisporus
AGABI2DRAFT_189243
I
M378DRAFT_213370
Amanita muscaria
M378DRAFT_213370
I
LACBIDRAFT_301563
Laccaria bicolor
LACBIDRAFT_301563
I
LACBIDRAFT_291829
Laccaria bicolor
LACBIDRAFT_291829
I
K443DRAFT_678969
Laccaria amethystina
K443DRAFT_678969
I
K443DRAFT_132577
Laccaria amethystina
K443DRAFT_132577
I
JAAARDRAFT_112445
Jaapia argillacea
JAAARDRAFT_112445
I
GYMLUDRAFT_181158
Gymnopus luxurians
GYMLUDRAFT_181158
I
GALMADRAFT_225495
Galerina marginata
GALMADRAFT_225495
I
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
FIBRA_04875
Fibroporia radiculosa
FIBRA_04875
I
CY34DRAFT_41572
Suillus luteus
CY34DRAFT_41572
I
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
CC1G_13761
Coprinopsis cinerea
CC1G_13761
I
CC1G_00679
Coprinopsis cinerea
CC1G_00679
I
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I