CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29811.m000540
(
Ricinus communis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
29811.m000540
T226977_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29811.m000540
Homeodomain
34
107
NTKRILKTPAQIMALEKFYNVMLVIMFLKGKFLAFSPEHNYPTEEMKSEVAEKIGLTEKQVSSWFCHRRLKDKN
Links
Other
Homeodomain
family TFs
Other
Ricinus communis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava16534.m1
Manihot esculenta
cassava16534.m1
I
0.826
Solyc11g065110.1
Solanum lycopersicum
Solyc11g065110.1
I
0.738
PGSC0003DMG400004714
Solanum tuberosum
PGSC0003DMG400004714
I
0.729
mgf007720m
Mimulus guttatus
mgf007720m
I
0.710
Solyc12g099760.1
Solanum lycopersicum
Solyc12g099760.1
I
0.671
Aquca_014_00610
Aquilegia coerulea
Aquca_014_00610
I
0.623
Thhalv10028592m.g
Eutrema salsugineum
Thhalv10028592m.g
I
0.601