Solyc12g099760.1 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc12g099760.1 T223639_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.612 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g099760.1.1 Homeodomain 19 75

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.776
mgf007720m Mimulus guttatus mgf007720m I 0.731
Solyc11g065110.1 Solanum lycopersicum Solyc11g065110.1 I 0.711
cassava16534.m1 Manihot esculenta cassava16534.m1 I 0.689
29811.m000540 Ricinus communis 29811.m000540 N 0.671
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.661
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.657
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.657
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.657
Cla008712 Citrullus lanatus Cla008712 I 0.657
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.655
MDP0000207866 Malus domestica MDP0000207866 I 0.655
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.628
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.628
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.622
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.622
Ca_21400 Cicer arietinum Ca_21400 I 0.618
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I 0.618
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.617
PK25011.1 Cannabis sativa PK25011.1 D 0.612
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.606
Bo9g006450 Brassica oleracea Bo9g006450 I 0.606
Bra034196 Brassica rapa Bra034196 I 0.606
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.606
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.606
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.606
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.604