GLYMA18G14910 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA18G14910 T218903_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.780 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA18G14910.1 Homeodomain 19 75
GLYMA18G14910.2 Homeodomain 19 75

Links

Other Homeodomain family TFs
Other Glycine max TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.867
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.808
PK25011.1 Cannabis sativa PK25011.1 D 0.780
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.754
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I 0.734
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.700
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.700
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.700
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.697
MDP0000207866 Malus domestica MDP0000207866 I 0.687
Cla008712 Citrullus lanatus Cla008712 I 0.687
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.682
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.676
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.676
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.675
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.666
Ca_21400 Cicer arietinum Ca_21400 I 0.639
mgf007720m Mimulus guttatus mgf007720m I 0.636
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.633
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.632
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.628
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.618
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.616
Aquca_014_00610 Aquilegia coerulea Aquca_014_00610 I 0.616
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.616
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.616
Bo9g006450 Brassica oleracea Bo9g006450 I 0.611
Bra034196 Brassica rapa Bra034196 I 0.611
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.600